Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 9620 and 9621 are separated by 399 nucleotides9621 and 9622 are separated by 715 nucleotides9622 and 9623 are separated by 183 nucleotides9623 and 9624 are separated by 293 nucleotides mRNA_1252: 9620 - BLAST glycosyltransferase family 22 protein [Mixia osmu..., at 757,595 to 759,040 9620 mRNA_1253: 9621 - K04554 UBE2J2, NCUBE2, UBC6 ubiquitin-conjugating enzyme E2 J2, at 759,440 to 760,414 9621 mRNA_1254: 9622 - K02150 ATPeV1E, ATP6E V-type H+-transporting ATPase subunit E, at 761,130 to 762,354 9622 mRNA_1255: 9623 - KOG1808 AAA ATPase containing von Willebrand factor type A (vWA) domain, at 762,538 to 767,686 9623 mRNA_1256: 9624 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF81383, at 767,980 to 768,375 9624
Group Condition mRNA_1252 mRNA_1253 mRNA_1254 mRNA_1255 mRNA_1256
9620 9621 9622 9623 9624
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -1.5 N.D. -0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.2 N.D. -0.0 N.D.
growth on ypd YPD -0.3 +0.3 N.D. -0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.3 N.D. +0.0 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.2 N.D. -0.0 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.2 -0.0 N.D. -0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.1 N.D. -0.0 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.3 -0.1 N.D. -0.0 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.0 +0.3 N.D. -0.1 N.D.
auxotrophy Dropout Complete +0.1 +0.2 N.D. -0.1 N.D.
growth on ricinoleic acid YNB Glucose +0.2 +0.3 N.D. -0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.3 +0.1 N.D. +0.0 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 +0.3 N.D. -0.1 N.D.
auxotrophy YNB Glucose +0.2 +0.5 N.D. -0.2 N.D.
growth on oleic acid YNB Glucose +0.2 +0.4 N.D. +0.0 N.D.
growth on oleic acid YNB Oleic Acid +0.2 +0.4 N.D. +0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 +0.7 N.D. +0.0 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 +0.8 N.D. -0.0 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +1.3 N.D. +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +1.0 N.D. +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +1.5 N.D. +0.1 N.D.
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