Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9623 and 9624 are separated by 293 nucleotides9624 and 9625 are separated by 447 nucleotides9625 and 9626 are separated by 130 nucleotides9626 and 9627 are separated by 425 nucleotides mRNA_1255: 9623 - KOG1808 AAA ATPase containing von Willebrand factor type A (vWA) domain, at 762,538 to 767,686 9623 mRNA_1256: 9624 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF81383, at 767,980 to 768,375 9624 mRNA_1257: 9625 - KOG1947 Leucine rich repeat proteins, some proteins contain F-box, at 768,823 to 770,242 9625 mRNA_1258: 9626 - Hypothetical Protein, at 770,373 to 771,317 9626 mRNA_1259: 9627 - K10887 DCLRE1C, ARTEMIS, SCIDA DNA cross-link repair 1C protein, at 771,743 to 774,831 9627
Group Condition mRNA_1255 mRNA_1256 mRNA_1257 mRNA_1258 mRNA_1259
9623 9624 9625 9626 9627
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 N.D. -0.7 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 N.D. -0.2 N.D. -0.2
growth on ypd YPD -0.1 N.D. -0.2 N.D. +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.0 N.D. -0.1 N.D. +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 N.D. -0.2 N.D. +0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 N.D. +0.0 N.D. +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.0 N.D. -0.0 N.D. +0.2
ypd buoyancy 40 hrs High Buoyancy -0.0 N.D. -0.0 N.D. +0.2
growth on ricinoleic acid YNB Glucose -0.1 N.D. +0.0 N.D. +0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.0 N.D. +0.1 N.D. +0.1
growth on oleic acid YNB Glucose +0.0 N.D. -0.2 N.D. +0.3
growth on oleic acid YNB Oleic Acid +0.1 N.D. -0.2 N.D. +0.4
auxotrophy YNB Glucose -0.2 N.D. +0.1 N.D. +0.4
auxotrophy Dropout Complete -0.1 N.D. -0.0 N.D. +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 N.D. +0.0 N.D. +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 N.D. -0.1 N.D. +0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 N.D. +0.0 N.D. +0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.0 N.D. +0.0 N.D. +0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 N.D. +0.0 N.D. +0.4
auxotrophy YNB Glucose 75mM Arginine -0.1 N.D. +0.3 N.D. +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 N.D. +0.2 N.D. +0.4
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