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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9629 and 9630 are separated by 254 nucleotides
9630 and 9631 are separated by 166 nucleotides
9631 and 9632 are separated by 471 nucleotides
9632 and 9633 are separated by 83 nucleotides
mRNA_1261: 9629 - K04712 DEGS sphingolipid Delta-4 desaturase, at 778,890 to 780,707
9629
mRNA_1262: 9630 - KOG4781 Uncharacterized conserved protein, at 780,962 to 782,100
9630
mRNA_1263: 9631 - K06130 LYPLA2 lysophospholipase II, at 782,267 to 783,226
9631
mRNA_1264: 9632 - HMMPfam-Mitochondrial ribosomal protein subunit L20-PF12824, at 783,698 to 784,459
9632
mRNA_1265: 9633 - K14861 URB1 nucleolar pre-ribosomal-associated protein 1, at 784,543 to 790,877
9633
Group
Condition
mRNA
_1261
mRNA
_1262
mRNA
_1263
mRNA
_1264
mRNA
_1265
9629
9630
9631
9632
9633
facs on lipid accumulation
Sorted Low BODIPY Gate
-4.3
-0.2
+0.5
-0.1
+0.6
facs on lipid accumulation
Sorted No BODIPY Gate
-3.1
-0.4
+0.5
+0.2
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.8
-0.5
+0.4
+0.5
-1.3
auxotrophy
YNB Glucose 75mM Methionine
+0.6
-0.3
+0.2
+0.1
-2.3
auxotrophy
YNB Glucose 75mM Arginine
-0.0
-0.3
+0.6
+0.1
-2.0
facs on lipid accumulation
Sorted High BODIPY Gate
-1.0
-0.3
-0.1
-0.4
+0.3
auxotrophy
YNB Glucose
-0.1
-0.1
+0.2
+0.2
-1.3
growth on ricinoleic acid
YNB Glucose
-0.8
+0.3
-0.2
+0.5
-0.8
growth on oleic acid
YNB Glucose
-0.5
-0.2
+0.2
+0.1
-0.6
auxotrophy
Dropout Complete
+1.9
-0.5
+0.0
-0.2
-1.2
growth on oleic acid
YNB Oleic Acid
+1.2
-0.2
-0.0
+0.0
-0.9
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-0.2
+0.5
+0.5
-0.5
growth on ypd
YPD
+1.1
+0.2
-0.7
+0.4
-0.7
growth on ricinoleic acid
YNB Methylricinoleic Acid
+1.2
-0.1
+0.0
+0.4
-0.9
ypd buoyancy
40 hrs High Buoyancy
-0.3
+0.2
+0.2
+0.4
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.4
+0.1
+0.2
+0.2
+0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.1
+0.1
+0.5
+0.3
+0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.1
+0.4
+0.2
+0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
+1.0
-0.1
+0.1
-0.1
+0.7
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+1.6
+0.3
+0.1
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+1.9
+0.5
+0.1
+0.2
+0.8
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