Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9631 and 9632 are separated by 471 nucleotides9632 and 9633 are separated by 83 nucleotides9633 and 9634 are separated by 224 nucleotides9634 and 9635 are separated by 502 nucleotides mRNA_1263: 9631 - K06130 LYPLA2 lysophospholipase II, at 782,267 to 783,226 9631 mRNA_1264: 9632 - HMMPfam-Mitochondrial ribosomal protein subunit L20-PF12824, at 783,698 to 784,459 9632 mRNA_1265: 9633 - K14861 URB1 nucleolar pre-ribosomal-associated protein 1, at 784,543 to 790,877 9633 mRNA_1266: 9634 - K00004 BDH, butB (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase, at 791,102 to 792,635 9634 mRNA_1267: 9635 - K00814 GPT, ALT alanine transaminase, at 793,138 to 795,041 9635
Group Condition mRNA_1263 mRNA_1264 mRNA_1265 mRNA_1266 mRNA_1267
9631 9632 9633 9634 9635
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 +0.5 -1.3 -0.7 -5.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 +0.4 -0.9 -1.1 -3.6
growth on oleic acid YNB Oleic Acid -0.0 +0.0 -0.9 -1.1 -3.0
growth on ricinoleic acid YNB Glucose -0.2 +0.5 -0.8 -1.2 -3.0
auxotrophy YNB Glucose 75mM Arginine +0.6 +0.1 -2.0 -0.3 -3.1
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.1 -2.3 +0.1 -2.3
auxotrophy YNB Glucose +0.2 +0.2 -1.3 -0.1 -2.9
growth on oleic acid YNB Glucose +0.2 +0.1 -0.6 -0.7 -3.0
auxotrophy Dropout Complete +0.0 -0.2 -1.2 -1.0 -0.7
growth on ypd YPD -0.7 +0.4 -0.7 +0.3 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.4 +0.3 +0.1 -0.6
facs on lipid accumulation Sorted No BODIPY Gate +0.5 +0.2 +0.1 -0.0 -1.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.5 -0.1 +0.6 +0.5 -1.9
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.1 +0.7 +0.0 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.2 +0.1 +0.3 -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.4 +0.2 +0.4 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.1 +0.1 +1.1 -0.5
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.4 +0.2 +0.2 +0.0
ypd buoyancy 40 hrs Low Buoyancy +0.5 +0.3 +0.3 +0.2 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.2 +0.8 +0.3 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.5 +0.5 -0.5 +0.7 +0.1
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