Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9633 and 9634 are separated by 224 nucleotides9634 and 9635 are separated by 502 nucleotides9635 and 9636 are separated by 364 nucleotides9636 and 9637 are separated by 261 nucleotides mRNA_1265: 9633 - K14861 URB1 nucleolar pre-ribosomal-associated protein 1, at 784,543 to 790,877 9633 mRNA_1266: 9634 - K00004 BDH, butB (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase, at 791,102 to 792,635 9634 mRNA_1267: 9635 - K00814 GPT, ALT alanine transaminase, at 793,138 to 795,041 9635 mRNA_1268: 9636 - K03790 rimJ ribosomal-protein-alanine N-acetyltransferase, at 795,406 to 796,307 9636 mRNA_1269: 9637 - K15628 PXA ATP-binding cassette, subfamily D (ALD), peroxisomal long-chain fatty acid import protein, at 796,569 to 799,890 9637
Group Condition mRNA_1265 mRNA_1266 mRNA_1267 mRNA_1268 mRNA_1269
9633 9634 9635 9636 9637
growth on ricinoleic acid YNB Ricinoleic Acid -1.3 -0.7 -5.0 -0.2 -0.0
growth on oleic acid YNB Oleic Acid -0.9 -1.1 -3.0 -0.4 -1.0
auxotrophy YNB Glucose 75mM Arginine -2.0 -0.3 -3.1 -0.0 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.9 -1.1 -3.6 +0.1 +0.1
growth on ricinoleic acid YNB Glucose -0.8 -1.2 -3.0 +0.3 -0.1
growth on oleic acid YNB Glucose -0.6 -0.7 -3.0 +0.0 -0.2
auxotrophy YNB Glucose 75mM Methionine -2.3 +0.1 -2.3 +0.2 -0.0
auxotrophy YNB Glucose -1.3 -0.1 -2.9 +0.2 -0.1
auxotrophy Dropout Complete -1.2 -1.0 -0.7 +0.1 +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.0 -1.3 +0.0 +0.3
growth on ypd YPD -0.7 +0.3 -0.3 +0.2 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.6 +0.5 -1.9 -0.2 +0.4
facs on lipid accumulation Sorted High BODIPY Gate +0.3 +0.1 -0.6 -0.0 -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.4 -0.1 -0.1 -0.2 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 +0.7 +0.1 -0.7 +0.4
ypd buoyancy 40 hrs Low Buoyancy +0.3 +0.2 -0.2 -0.3 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.3 -0.2 +0.4 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.2 +0.0 +0.2 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.7 +0.0 -0.5 +0.4 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +1.1 -0.5 +0.3 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.8 +0.3 -0.3 +0.3 -0.0
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