Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9635 and 9636 are separated by 364 nucleotides9636 and 9637 are separated by 261 nucleotides9637 and 9638 are separated by 702 nucleotides9638 and 9639 are separated by 483 nucleotides mRNA_1267: 9635 - K00814 GPT, ALT alanine transaminase, at 793,138 to 795,041 9635 mRNA_1268: 9636 - K03790 rimJ ribosomal-protein-alanine N-acetyltransferase, at 795,406 to 796,307 9636 mRNA_1269: 9637 - K15628 PXA ATP-binding cassette, subfamily D (ALD), peroxisomal long-chain fatty acid import protein, at 796,569 to 799,890 9637 mRNA_1270: 9638 - KOG0254 Predicted transporter (major facilitator superfamily), at 800,593 to 802,936 9638 mRNA_1271: 9639 - K05349 bglX beta-glucosidase, at 803,420 to 806,888 9639
Group Condition mRNA_1267 mRNA_1268 mRNA_1269 mRNA_1270 mRNA_1271
9635 9636 9637 9638 9639
growth on ricinoleic acid YNB Ricinoleic Acid -5.0 -0.2 -0.0 +0.1 +0.2
growth on oleic acid YNB Oleic Acid -3.0 -0.4 -1.0 +0.0 +0.1
auxotrophy YNB Glucose 75mM Arginine -3.1 -0.0 -0.2 -0.2 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -3.6 +0.1 +0.1 +0.1 -0.0
growth on oleic acid YNB Glucose -3.0 +0.0 -0.2 -0.1 +0.1
auxotrophy YNB Glucose -2.9 +0.2 -0.1 +0.0 -0.2
growth on ricinoleic acid YNB Glucose -3.0 +0.3 -0.1 +0.2 +0.1
auxotrophy YNB Glucose 75mM Methionine -2.3 +0.2 -0.0 +0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -1.9 -0.2 +0.4 +0.3 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -1.3 +0.0 +0.3 -0.0 +0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.6 -0.0 -0.2 +0.1 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 +0.3 -0.1 -0.4 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.2 -0.1 -0.1 -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.3 +0.2 -0.1 -0.0
auxotrophy Dropout Complete -0.7 +0.1 +0.2 +0.1 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 +0.4 -0.1 -0.3 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 +0.3 -0.0 -0.2 +0.1
growth on ypd YPD -0.3 +0.2 -0.0 +0.3 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -0.7 +0.4 -0.0 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.2 -0.0 -0.0 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 +0.4 +0.3 +0.2 +0.0
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