Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9636 and 9637 are separated by 261 nucleotides9637 and 9638 are separated by 702 nucleotides9638 and 9639 are separated by 483 nucleotides9639 and 9640 are separated by 756 nucleotides mRNA_1268: 9636 - K03790 rimJ ribosomal-protein-alanine N-acetyltransferase, at 795,406 to 796,307 9636 mRNA_1269: 9637 - K15628 PXA ATP-binding cassette, subfamily D (ALD), peroxisomal long-chain fatty acid import protein, at 796,569 to 799,890 9637 mRNA_1270: 9638 - KOG0254 Predicted transporter (major facilitator superfamily), at 800,593 to 802,936 9638 mRNA_1271: 9639 - K05349 bglX beta-glucosidase, at 803,420 to 806,888 9639 mRNA_1272: 9640 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 807,645 to 808,575 9640
Group Condition mRNA_1268 mRNA_1269 mRNA_1270 mRNA_1271 mRNA_1272
9636 9637 9638 9639 9640
growth on oleic acid YNB Oleic Acid -0.4 -1.0 +0.0 +0.1 +0.3
ypd buoyancy 40 hrs Low Buoyancy -0.3 +0.2 -0.1 -0.0 -0.4
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.0 -0.0 -0.2 -0.4
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.1 -0.1 -0.0 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 +0.4 -0.0 +0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.0 +0.1 -0.1 -0.3
auxotrophy YNB Glucose +0.2 -0.1 +0.0 -0.2 +0.1
growth on oleic acid YNB Glucose +0.0 -0.2 -0.1 +0.1 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.0 +0.1 +0.2 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.1 +0.1 -0.0 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.2 -0.2 +0.0 +0.7
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.2 +0.1 +0.1 +0.3
growth on ricinoleic acid YNB Glucose +0.3 -0.1 +0.2 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 -0.1 -0.3 +0.0 +0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +0.4 +0.3 -0.1 +0.2
auxotrophy Dropout Complete +0.1 +0.2 +0.1 +0.1 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.0 -0.2 +0.1 +0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 -0.1 -0.4 +0.1 +0.9
growth on ypd YPD +0.2 -0.0 +0.3 -0.2 +0.8
facs on lipid accumulation Sorted No BODIPY Gate +0.0 +0.3 -0.0 +0.1 +0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 +0.3 +0.2 +0.0 +0.7
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