Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
9637 and 9638 are separated by 702 nucleotides
9638 and 9639 are separated by 483 nucleotides
9639 and 9640 are separated by 756 nucleotides
9640 and 9641 are separated by 171 nucleotides
mRNA_1269: 9637 - K15628 PXA ATP-binding cassette, subfamily D (ALD), peroxisomal long-chain fatty acid import protein, at 796,569 to 799,890
9637
mRNA_1270: 9638 - KOG0254 Predicted transporter (major facilitator superfamily), at 800,593 to 802,936
9638
mRNA_1271: 9639 - K05349 bglX beta-glucosidase, at 803,420 to 806,888
9639
mRNA_1272: 9640 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 807,645 to 808,575
9640
mRNA_1273: 9641 - BLAST priB [Histoplasma capsulatum H143], at 808,747 to 810,374
9641
Group
Condition
mRNA
_1269
mRNA
_1270
mRNA
_1271
mRNA
_1272
mRNA
_1273
9637
9638
9639
9640
9641
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.0
-0.2
-0.4
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.0
+0.1
-0.1
-0.3
-0.3
growth on oleic acid
YNB Oleic Acid
-1.0
+0.0
+0.1
+0.3
+0.0
auxotrophy
YNB Glucose
-0.1
+0.0
-0.2
+0.1
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
+0.4
-0.0
+0.1
-0.1
-0.5
growth on ricinoleic acid
YNB Glucose
-0.1
+0.2
+0.1
-0.1
-0.3
ypd buoyancy
40 hrs Low Buoyancy
+0.2
-0.1
-0.0
-0.4
+0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.1
-0.0
-0.1
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.3
+0.0
+0.4
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
+0.1
-0.0
-0.1
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
+0.1
+0.2
+0.2
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.4
+0.1
+0.9
-0.5
auxotrophy
YNB Glucose 75mM Arginine
-0.2
-0.2
+0.0
+0.7
-0.1
auxotrophy
Dropout Complete
+0.2
+0.1
+0.1
+0.3
-0.4
growth on oleic acid
YNB Glucose
-0.2
-0.1
+0.1
+0.2
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.4
+0.3
-0.1
+0.2
-0.2
growth on ypd
YPD
-0.0
+0.3
-0.2
+0.8
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
-0.2
+0.1
+0.7
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
+0.1
+0.1
+0.3
+0.3
facs on lipid accumulation
Sorted No BODIPY Gate
+0.3
-0.0
+0.1
+0.6
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.3
+0.2
+0.0
+0.7
+0.1
remove
mRNA_1269
plot
remove
mRNA_1270
plot
remove
mRNA_1271
remove
mRNA_1272
plot
remove
mRNA_1273
plot