Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9638 and 9639 are separated by 483 nucleotides9639 and 9640 are separated by 756 nucleotides9640 and 9641 are separated by 171 nucleotides9641 and 9642 are separated by 205 nucleotides mRNA_1270: 9638 - KOG0254 Predicted transporter (major facilitator superfamily), at 800,593 to 802,936 9638 mRNA_1271: 9639 - K05349 bglX beta-glucosidase, at 803,420 to 806,888 9639 mRNA_1272: 9640 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 807,645 to 808,575 9640 mRNA_1273: 9641 - BLAST priB [Histoplasma capsulatum H143], at 808,747 to 810,374 9641 mRNA_1274: 9642 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 810,580 to 813,182 9642
Group Condition mRNA_1270 mRNA_1271 mRNA_1272 mRNA_1273 mRNA_1274
9638 9639 9640 9641 9642
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.2 -0.4 -0.1 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 +0.1 -0.1 -0.5 +0.0
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.1 -0.3 -0.3 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.0 -0.4 +0.2 +0.0
auxotrophy YNB Glucose +0.0 -0.2 +0.1 -0.3 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.0 -0.1 -0.2 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.2 +0.2 -0.4 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 -0.1 +0.2 -0.2 -0.2
auxotrophy Dropout Complete +0.1 +0.1 +0.3 -0.4 -0.0
growth on ricinoleic acid YNB Glucose +0.2 +0.1 -0.1 -0.3 +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.0 -0.1 +0.1 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 +0.0 +0.4 -0.0 +0.1
growth on ypd YPD +0.3 -0.2 +0.8 -0.1 -0.4
growth on oleic acid YNB Oleic Acid +0.0 +0.1 +0.3 +0.0 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.0 +0.7 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 +0.1 +0.9 -0.5 +0.4
growth on oleic acid YNB Glucose -0.1 +0.1 +0.2 +0.2 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.1 +0.6 +0.1 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 +0.1 +0.7 +0.1 +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.1 +0.3 +0.3 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.0 +0.7 +0.1 +0.1
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