Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9639 and 9640 are separated by 756 nucleotides9640 and 9641 are separated by 171 nucleotides9641 and 9642 are separated by 205 nucleotides9642 and 9643 are separated by 311 nucleotides mRNA_1271: 9639 - K05349 bglX beta-glucosidase, at 803,420 to 806,888 9639 mRNA_1272: 9640 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 807,645 to 808,575 9640 mRNA_1273: 9641 - BLAST priB [Histoplasma capsulatum H143], at 808,747 to 810,374 9641 mRNA_1274: 9642 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 810,580 to 813,182 9642 mRNA_1275: 9643 - K11426 SMYD SET and MYND domain-containing protein, at 813,494 to 815,725 9643
Group Condition mRNA_1271 mRNA_1272 mRNA_1273 mRNA_1274 mRNA_1275
9639 9640 9641 9642 9643
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -0.1 -0.5 +0.0 -0.5
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.4 -0.1 -0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.3 -0.3 +0.1 +0.0
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.4 +0.2 +0.0 -0.0
auxotrophy YNB Glucose -0.2 +0.1 -0.3 +0.1 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -0.1 -0.2 -0.0 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.2 -0.2 -0.2 +0.2
growth on ricinoleic acid YNB Glucose +0.1 -0.1 -0.3 +0.2 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 +0.2 -0.4 -0.0 +0.1
growth on ypd YPD -0.2 +0.8 -0.1 -0.4 -0.1
auxotrophy Dropout Complete +0.1 +0.3 -0.4 -0.0 +0.0
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.1 +0.1 +0.2 -0.1
growth on oleic acid YNB Oleic Acid +0.1 +0.3 +0.0 -0.1 +0.2
auxotrophy YNB Glucose 75mM Arginine +0.0 +0.7 -0.1 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 +0.4 -0.0 +0.1 +0.1
growth on oleic acid YNB Glucose +0.1 +0.2 +0.2 +0.1 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.9 -0.5 +0.4 -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.3 +0.3 +0.2 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.6 +0.1 -0.2 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 +0.7 +0.1 +0.1 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.7 +0.1 +0.2 +0.1
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