Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9640 and 9641 are separated by 171 nucleotides9641 and 9642 are separated by 205 nucleotides9642 and 9643 are separated by 311 nucleotides9643 and 9644 are separated by 172 nucleotides mRNA_1272: 9640 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 807,645 to 808,575 9640 mRNA_1273: 9641 - BLAST priB [Histoplasma capsulatum H143], at 808,747 to 810,374 9641 mRNA_1274: 9642 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 810,580 to 813,182 9642 mRNA_1275: 9643 - K11426 SMYD SET and MYND domain-containing protein, at 813,494 to 815,725 9643 mRNA_1276: 9644 - K01070 frmB, ESD, fghA S-formylglutathione hydrolase, at 815,898 to 817,599 9644
Group Condition mRNA_1272 mRNA_1273 mRNA_1274 mRNA_1275 mRNA_1276
9640 9641 9642 9643 9644
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.5 +0.0 -0.5 -0.4
ypd buoyancy 40 hrs High Buoyancy -0.4 -0.1 -0.1 -0.1 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.3 +0.1 +0.0 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.4 +0.2 +0.0 -0.0 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.4 -0.0 +0.1 +0.0
growth on ricinoleic acid YNB Glucose -0.1 -0.3 +0.2 +0.0 -0.0
auxotrophy Dropout Complete +0.3 -0.4 -0.0 +0.0 +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.1 +0.2 -0.1 +0.1
auxotrophy YNB Glucose +0.1 -0.3 +0.1 -0.0 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.2 -0.0 +0.1 +0.5
growth on oleic acid YNB Oleic Acid +0.3 +0.0 -0.1 +0.2 +0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.3 +0.3 +0.2 -0.1 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -0.2 -0.2 +0.2 +0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 -0.0 +0.1 +0.1 -0.0
growth on ypd YPD +0.8 -0.1 -0.4 -0.1 +0.5
growth on oleic acid YNB Glucose +0.2 +0.2 +0.1 +0.1 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.7 -0.1 -0.1 +0.1 +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.9 -0.5 +0.4 -0.1 +0.4
facs on lipid accumulation Sorted No BODIPY Gate +0.6 +0.1 -0.2 +0.3 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.7 +0.1 +0.2 +0.1 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.7 +0.1 +0.1 +0.2 +0.1
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