Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9642 and 9643 are separated by 311 nucleotides9643 and 9644 are separated by 172 nucleotides9644 and 9645 are separated by 151 nucleotides9645 and 9646 are separated by 606 nucleotides mRNA_1274: 9642 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 810,580 to 813,182 9642 mRNA_1275: 9643 - K11426 SMYD SET and MYND domain-containing protein, at 813,494 to 815,725 9643 mRNA_1276: 9644 - K01070 frmB, ESD, fghA S-formylglutathione hydrolase, at 815,898 to 817,599 9644 mRNA_1277: 9645 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 817,751 to 818,897 9645 mRNA_1278: 9646 - KOG1414 Transcriptional activator FOSB/c-Fos and related bZIP transcription factors, at 819,504 to 821,830 9646
Group Condition mRNA_1274 mRNA_1275 mRNA_1276 mRNA_1277 mRNA_1278
9642 9643 9644 9645 9646
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 -0.5 -0.4 -1.7 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.1 -0.3 -0.4 +0.0
auxotrophy Dropout Complete -0.0 +0.0 +0.2 -0.2 -0.6
growth on oleic acid YNB Oleic Acid -0.1 +0.2 +0.0 -0.7 -0.1
growth on ypd YPD -0.4 -0.1 +0.5 -0.2 -0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.3 +0.3 -0.9 +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.1 -0.3 -0.5 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 +0.1 +0.5 -0.5 -0.4
growth on ricinoleic acid YNB Glucose +0.2 +0.0 -0.0 -0.0 -0.4
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.1 +0.1 -0.2 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.0 -0.1 -0.0 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 +0.1 +0.0 -0.0 -0.1
growth on oleic acid YNB Glucose +0.1 +0.1 +0.1 -0.3 -0.0
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.0 +0.1 +0.1 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.2 +0.1 -0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.1 +0.4 +0.2 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.1 -0.0 +0.5 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +0.2 +0.5 -0.3 +0.2
auxotrophy YNB Glucose +0.1 -0.0 +0.3 +0.6 -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.1 +0.0 +0.2 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.4 -0.1 +0.4 +0.7 -0.5
remove
mRNA_1274
plot
remove
mRNA_1275
plot
remove
mRNA_1276
remove
mRNA_1277
plot
remove
mRNA_1278
plot