Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9652 and 9653 are separated by 713 nucleotides9653 and 9654 are separated by 244 nucleotides9654 and 9655 are separated by 308 nucleotides9655 and 9656 are separated by 721 nucleotides mRNA_1284: 9652 - K12897 TRA2 transformer-2 protein, at 832,225 to 833,165 9652 mRNA_1285: 9653 - Interpro Ribosomal protein 60S L18 and 50S L18e 0, at 833,879 to 834,376 9653 mRNA_1286: 9654 - HMMPfam-short chain dehydrogenase-PF00106,SUPERFAMILY--SSF51735, at 834,621 to 836,012 9654 mRNA_1287: 9655 - KOG1087 Cytosolic sorting protein GGA2/TOM1, at 836,321 to 838,675 9655 mRNA_1288: 9656 - HMMPfam-CFEM domain-PF05730,SMART--SM00747, at 839,397 to 840,221 9656
Group Condition mRNA_1284 mRNA_1285 mRNA_1286 mRNA_1287 mRNA_1288
9652 9653 9654 9655 9656
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.3 -0.9 -3.1 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -1.1 -0.1 +0.3 -2.8 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -3.5 +0.0 +0.2 -0.3
growth on ypd YPD -0.0 -3.2 -0.1 +0.3 -0.6
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.0 -0.0 -2.5 -0.2
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.4 -0.2 -0.3 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 +0.4 -0.1 -1.2 +0.3
growth on oleic acid YNB Oleic Acid -0.1 +0.8 -0.6 -0.7 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.6 -0.3 -0.6 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 -0.7 +0.6 +0.5 +0.2
auxotrophy YNB Glucose 75mM Methionine +0.3 +0.2 -0.0 -0.4 -0.1
growth on oleic acid YNB Glucose +0.2 +0.4 -0.3 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.9 +0.4 -0.1 +0.7
growth on ricinoleic acid YNB Glucose +0.7 -0.4 -0.3 +0.3 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.4 -0.6 -0.0 +0.7 -0.0
auxotrophy Dropout Complete +0.5 +0.2 +0.0 -0.0 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.1 -0.2 +0.7 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.4 +1.3 -0.1 -0.5 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 -0.3 +0.5 -0.3 +0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 -0.8 +1.1 +0.1 +0.4
auxotrophy YNB Glucose +0.7 +0.5 +0.1 +0.0 +0.1
remove
mRNA_1284
plot
remove
mRNA_1285
plot
remove
mRNA_1286
remove
mRNA_1287
plot
remove
mRNA_1288
plot