Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
9653 and 9654 are separated by 244 nucleotides
9654 and 9655 are separated by 308 nucleotides
9655 and 9656 are separated by 721 nucleotides
9656 and 9657 are separated by 237 nucleotides
mRNA_1285: 9653 - Interpro Ribosomal protein 60S L18 and 50S L18e 0, at 833,879 to 834,376
9653
mRNA_1286: 9654 - HMMPfam-short chain dehydrogenase-PF00106,SUPERFAMILY--SSF51735, at 834,621 to 836,012
9654
mRNA_1287: 9655 - KOG1087 Cytosolic sorting protein GGA2/TOM1, at 836,321 to 838,675
9655
mRNA_1288: 9656 - HMMPfam-CFEM domain-PF05730,SMART--SM00747, at 839,397 to 840,221
9656
mRNA_1289: 9657 - K05681 ABCG2, CD338 ATP-binding cassette, subfamily G (WHITE), member 2, at 840,459 to 844,214
9657
Group
Condition
mRNA
_1285
mRNA
_1286
mRNA
_1287
mRNA
_1288
mRNA
_1289
9653
9654
9655
9656
9657
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
-0.9
-3.1
-0.0
+0.1
growth on ypd
YPD
-3.2
-0.1
+0.3
-0.6
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-3.5
+0.0
+0.2
-0.3
+0.8
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
+0.3
-2.8
-0.4
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
-0.0
-2.5
-0.2
+0.2
ypd buoyancy
40 hrs High Buoyancy
-0.4
-0.2
-0.3
-0.0
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.4
-0.1
-1.2
+0.3
-0.0
growth on ricinoleic acid
YNB Glucose
-0.4
-0.3
+0.3
+0.1
-0.3
growth on oleic acid
YNB Oleic Acid
+0.8
-0.6
-0.7
-0.1
+0.0
ypd buoyancy
40 hrs Low Buoyancy
+0.6
-0.3
-0.6
-0.1
-0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.2
-0.0
-0.4
-0.1
-0.1
growth on oleic acid
YNB Glucose
+0.4
-0.3
-0.1
-0.1
-0.2
auxotrophy
Dropout Complete
+0.2
+0.0
-0.0
-0.1
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.6
-0.0
+0.7
-0.0
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.9
+0.4
-0.1
+0.7
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
-0.2
+0.7
+0.1
-0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.7
+0.6
+0.5
+0.2
-0.2
auxotrophy
YNB Glucose 75mM Arginine
+1.3
-0.1
-0.5
-0.2
-0.0
auxotrophy
YNB Glucose
+0.5
+0.1
+0.0
+0.1
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.8
+1.1
+0.1
+0.4
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
+0.5
-0.3
+0.6
+0.1
remove
mRNA_1285
plot
remove
mRNA_1286
plot
remove
mRNA_1287
remove
mRNA_1288
plot
remove
mRNA_1289
plot