Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9656 and 9657 are separated by 237 nucleotides9657 and 9658 are separated by 254 nucleotides9658 and 9659 are separated by 112 nucleotides9659 and 9660 are separated by 167 nucleotides mRNA_1288: 9656 - HMMPfam-CFEM domain-PF05730,SMART--SM00747, at 839,397 to 840,221 9656 mRNA_1289: 9657 - K05681 ABCG2, CD338 ATP-binding cassette, subfamily G (WHITE), member 2, at 840,459 to 844,214 9657 mRNA_1290: 9658 - K03872 TCEB1 transcription elongation factor B, polypeptide 1, at 844,469 to 844,987 9658 mRNA_1291: 9659 - KOG3350 Uncharacterized conserved protein, at 845,100 to 846,215 9659 mRNA_1292: 9660 - K10848 ERCC4, XPF DNA excision repair protein ERCC-4, at 846,383 to 850,419 9660
Group Condition mRNA_1288 mRNA_1289 mRNA_1290 mRNA_1291 mRNA_1292
9656 9657 9658 9659 9660
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 +0.1 -1.5 N.D. -1.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.2 -2.0 N.D. +0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 +0.8 -2.8 N.D. +0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.2 -0.5 N.D. -0.8
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.1 +0.0 N.D. -1.3
growth on ypd YPD -0.6 -0.3 -0.2 N.D. +0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 -0.0 -0.9 N.D. -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.4 -0.0 N.D. -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.1 -0.3 N.D. -0.0
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.0 +0.3 N.D. -0.6
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.1 +0.1 N.D. -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.1 -0.2 N.D. +0.2
growth on oleic acid YNB Glucose -0.1 -0.2 +0.3 N.D. -0.0
growth on oleic acid YNB Oleic Acid -0.1 +0.0 +0.5 N.D. -0.2
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.0 +0.4 N.D. +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.7 -0.0 +0.0 N.D. -0.3
auxotrophy YNB Glucose +0.1 -0.1 +0.6 N.D. +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 -0.2 +0.7 N.D. -0.2
growth on ricinoleic acid YNB Glucose +0.1 -0.3 +0.9 N.D. +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.6 +0.1 +0.2 N.D. +0.0
auxotrophy Dropout Complete -0.1 -0.2 +1.7 N.D. +0.3
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