Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9659 and 9660 are separated by 167 nucleotides9660 and 9661 are separated by 438 nucleotides9661 and 9662 are separated by 831 nucleotides9662 and 9663 are separated by 1022 nucleotides mRNA_1291: 9659 - KOG3350 Uncharacterized conserved protein, at 845,100 to 846,215 9659 mRNA_1292: 9660 - K10848 ERCC4, XPF DNA excision repair protein ERCC-4, at 846,383 to 850,419 9660 mRNA_1293: 9661 - Hypothetical Protein, at 850,858 to 851,999 9661 mRNA_1294: 9662 - K20369 ERV29, SURF4 ER-derived vesicles protein, at 852,831 to 853,984 9662 mRNA_1295: 9663 - Hypothetical Protein, at 855,007 to 856,078 9663
Group Condition mRNA_1291 mRNA_1292 mRNA_1293 mRNA_1294 mRNA_1295
9659 9660 9661 9662 9663
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -1.2 -0.1 -2.4 +0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. -1.3 +0.2 -0.9 +0.4
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.8 -0.0 -1.3 +0.6
ypd buoyancy 40 hrs High Buoyancy N.D. -0.6 +0.2 -0.8 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.0 -0.3 -0.4 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.3 +0.1 -1.3 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.3 -0.3 -0.1 +0.1
growth on ypd YPD N.D. +0.2 -0.5 -0.5 +0.5
auxotrophy YNB Glucose N.D. +0.1 -0.6 -0.1 +0.3
growth on oleic acid YNB Glucose N.D. -0.0 +0.1 +0.0 -0.4
growth on oleic acid YNB Oleic Acid N.D. -0.2 +0.1 -0.4 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.1 -0.3 +0.2 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.2 -0.3 +0.3 +0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.2 +0.2 -0.4 -0.0
auxotrophy YNB Glucose 75mM Methionine N.D. -0.0 -0.4 +0.0 +0.4
auxotrophy YNB Glucose 75mM Arginine N.D. +0.2 -0.5 +0.0 +0.4
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.0 +0.3 +0.0 +0.0
growth on ricinoleic acid YNB Glucose N.D. +0.2 -0.2 +0.2 +0.4
auxotrophy Dropout Complete N.D. +0.3 -0.7 +0.3 +0.7
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.2 -0.2 +0.9 +0.6
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.1 +0.3 +0.7 +0.6
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