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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9668 and 9669 are separated by 805 nucleotides
9669 and 9670 are separated by 296 nucleotides
9670 and 9671 are separated by 4019 nucleotides
9671 and 9672 are separated by 1628 nucleotides
mRNA_1300: 9668 - BLAST polynucleotide 5-hydroxyl-kinase grc3 [Xanthophyllomy..., at 862,697 to 864,122
9668
mRNA_1301: 9669 - K06947 GRC3, NOL9 polynucleotide 5'-hydroxyl-kinase GRC3/NOL9, at 864,928 to 866,257
9669
mRNA_1302: 9670 - Hypothetical Protein, at 866,554 to 866,811
9670
mRNA_1303: 9671 - Hypothetical Protein, at 870,831 to 871,307
9671
mRNA_1304: 9672 - Hypothetical Protein, at 872,936 to 873,714
9672
Group
Condition
mRNA
_1300
mRNA
_1301
mRNA
_1302
mRNA
_1303
mRNA
_1304
9668
9669
9670
9671
9672
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.1
-0.4
N.D.
N.D.
-0.6
ypd buoyancy
40 hrs No Buoyancy Separation
+0.0
-1.5
N.D.
N.D.
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.9
+0.2
N.D.
N.D.
-0.6
auxotrophy
Dropout Complete
-0.6
-0.0
N.D.
N.D.
-0.6
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.6
+0.7
N.D.
N.D.
-0.8
auxotrophy
YNB Glucose 75mM Arginine
-0.4
+0.4
N.D.
N.D.
-0.7
growth on ypd
YPD
-0.5
+0.3
N.D.
N.D.
-0.4
growth on ricinoleic acid
YNB Glucose
-0.7
+0.6
N.D.
N.D.
-0.5
facs on lipid accumulation
Sorted High BODIPY Gate
-1.0
+0.6
N.D.
N.D.
+0.1
auxotrophy
YNB Glucose
-0.3
+0.6
N.D.
N.D.
-0.5
growth on oleic acid
YNB Oleic Acid
-0.2
+0.2
N.D.
N.D.
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.6
+0.8
N.D.
N.D.
-0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.3
+0.6
N.D.
N.D.
-0.4
ypd buoyancy
40 hrs High Buoyancy
-0.3
+0.2
N.D.
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
+0.7
N.D.
N.D.
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
+0.6
N.D.
N.D.
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
+0.2
N.D.
N.D.
+0.4
ypd buoyancy
40 hrs Median Buoyancy
-0.2
+0.2
N.D.
N.D.
+0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.3
+0.6
N.D.
N.D.
+0.4
growth on oleic acid
YNB Glucose
-0.0
+0.4
N.D.
N.D.
+0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
+1.2
N.D.
N.D.
+0.1
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