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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9670 and 9671 are separated by 4019 nucleotides
9671 and 9672 are separated by 1628 nucleotides
9672 and 9673 are separated by 5989 nucleotides
9673 and 9674 are separated by 1164 nucleotides
mRNA_1302: 9670 - Hypothetical Protein, at 866,554 to 866,811
9670
mRNA_1303: 9671 - Hypothetical Protein, at 870,831 to 871,307
9671
mRNA_1304: 9672 - Hypothetical Protein, at 872,936 to 873,714
9672
mRNA_1305: 9673 - Hypothetical Protein, at 879,704 to 880,783
9673
mRNA_1306: 9674 - HMMPfam-RNase H-PF00075,ProSiteProfiles-RNase H domain profile.-PS50879,SUPERFAMILY--SSF53098, at 881,948 to 882,184
9674
Group
Condition
mRNA
_1302
mRNA
_1303
mRNA
_1304
mRNA
_1305
mRNA
_1306
9670
9671
9672
9673
9674
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
N.D.
-0.1
-0.2
-1.0
growth on ricinoleic acid
YNB Glucose
N.D.
N.D.
-0.5
-0.2
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
N.D.
-0.8
-0.1
+0.0
auxotrophy
Dropout Complete
N.D.
N.D.
-0.6
-0.4
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
N.D.
-0.3
-0.3
+0.0
growth on ypd
YPD
N.D.
N.D.
-0.4
-0.7
+0.5
auxotrophy
YNB Glucose
N.D.
N.D.
-0.5
-0.1
+0.1
auxotrophy
YNB Glucose 75mM Arginine
N.D.
N.D.
-0.7
-0.3
+0.5
growth on oleic acid
YNB Oleic Acid
N.D.
N.D.
-0.1
-0.2
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
N.D.
-0.6
+0.0
+0.2
ypd buoyancy
40 hrs Low Buoyancy
N.D.
N.D.
+0.4
-0.2
-0.5
ypd buoyancy
40 hrs Median Buoyancy
N.D.
N.D.
+0.3
+0.0
-0.3
ypd buoyancy
40 hrs High Buoyancy
N.D.
N.D.
+0.1
+0.0
-0.1
growth on oleic acid
YNB Glucose
N.D.
N.D.
+0.4
-0.3
+0.1
auxotrophy
YNB Glucose 75mM Methionine
N.D.
N.D.
-0.4
-0.0
+0.7
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
N.D.
-0.6
-0.2
+1.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
N.D.
-0.2
-0.1
+0.9
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
N.D.
+0.1
-0.2
+0.8
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
N.D.
-0.2
+0.3
+0.8
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
N.D.
+0.1
-0.1
+0.8
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
N.D.
+0.4
+0.1
+1.1
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