Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
9672 and 9673 are separated by 5989 nucleotides
9673 and 9674 are separated by 1164 nucleotides
9674 and 9675 are separated by 5181 nucleotides
9675 and 9676 are separated by 2616 nucleotides
mRNA_1304: 9672 - Hypothetical Protein, at 872,936 to 873,714
9672
mRNA_1305: 9673 - Hypothetical Protein, at 879,704 to 880,783
9673
mRNA_1306: 9674 - HMMPfam-RNase H-PF00075,ProSiteProfiles-RNase H domain profile.-PS50879,SUPERFAMILY--SSF53098, at 881,948 to 882,184
9674
mRNA_1307: 9675 - Hypothetical Protein, at 887,366 to 887,845
9675
mRNA_1308: 9676 - KOG0342 ATP-dependent RNA helicase pitchoune, at 890,462 to 892,850
9676
Group
Condition
mRNA
_1304
mRNA
_1305
mRNA
_1306
mRNA
_1307
mRNA
_1308
9672
9673
9674
9675
9676
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.2
-1.0
-0.1
N.D.
growth on ricinoleic acid
YNB Glucose
-0.5
-0.2
-0.1
+0.0
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.8
-0.1
+0.0
-0.0
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
-0.3
+0.0
+0.0
N.D.
growth on ypd
YPD
-0.4
-0.7
+0.5
+0.1
N.D.
auxotrophy
Dropout Complete
-0.6
-0.4
+0.2
+0.2
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.6
+0.0
+0.2
-0.0
N.D.
growth on oleic acid
YNB Oleic Acid
-0.1
-0.2
-0.1
+0.1
N.D.
auxotrophy
YNB Glucose
-0.5
-0.1
+0.1
+0.3
N.D.
ypd buoyancy
40 hrs Low Buoyancy
+0.4
-0.2
-0.5
+0.1
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.3
+0.0
-0.3
+0.0
N.D.
ypd buoyancy
40 hrs High Buoyancy
+0.1
+0.0
-0.1
-0.0
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.7
-0.3
+0.5
+0.5
N.D.
growth on oleic acid
YNB Glucose
+0.4
-0.3
+0.1
+0.1
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
-0.1
+0.9
-0.1
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.4
-0.0
+0.7
+0.3
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.6
-0.2
+1.1
+0.3
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
-0.2
+0.8
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-0.1
+0.8
-0.0
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
+0.3
+0.8
+0.0
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.4
+0.1
+1.1
-0.1
N.D.
remove
mRNA_1304
plot
remove
mRNA_1305
plot
remove
mRNA_1306
remove
mRNA_1307
plot
remove
mRNA_1308
plot