Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9674 and 9675 are separated by 5181 nucleotides9675 and 9676 are separated by 2616 nucleotides9676 and 9677 are separated by 752 nucleotides9677 and 9678 are separated by 275 nucleotides mRNA_1306: 9674 - HMMPfam-RNase H-PF00075,ProSiteProfiles-RNase H domain profile.-PS50879,SUPERFAMILY--SSF53098, at 881,948 to 882,184 9674 mRNA_1307: 9675 - Hypothetical Protein, at 887,366 to 887,845 9675 mRNA_1308: 9676 - KOG0342 ATP-dependent RNA helicase pitchoune, at 890,462 to 892,850 9676 mRNA_1309: 9677 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 893,603 to 895,450 9677 mRNA_1310: 9678 - KOG3022 Predicted ATPase, nucleotide-binding, at 895,726 to 897,428 9678
Group Condition mRNA_1306 mRNA_1307 mRNA_1308 mRNA_1309 mRNA_1310
9674 9675 9676 9677 9678
ypd buoyancy 40 hrs No Buoyancy Separation -1.0 -0.1 N.D. +0.4 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -0.0 N.D. -0.7 N.D.
growth on ypd YPD +0.5 +0.1 N.D. -1.1 N.D.
growth on oleic acid YNB Oleic Acid -0.1 +0.1 N.D. -0.4 N.D.
growth on oleic acid YNB Glucose +0.1 +0.1 N.D. -0.4 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.5 +0.1 N.D. +0.4 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.3 +0.0 N.D. +0.4 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.0 N.D. +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.8 -0.0 N.D. -0.6 N.D.
growth on ricinoleic acid YNB Glucose -0.1 +0.0 N.D. +0.3 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 +0.0 N.D. +0.2 N.D.
auxotrophy YNB Glucose +0.1 +0.3 N.D. -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.9 -0.1 N.D. -0.4 N.D.
auxotrophy Dropout Complete +0.2 +0.2 N.D. -0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.8 +0.0 N.D. -0.4 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 -0.0 N.D. +0.5 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.8 -0.1 N.D. +0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.5 +0.5 N.D. -0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.7 +0.3 N.D. -0.0 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +1.1 -0.1 N.D. +0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +1.1 +0.3 N.D. -0.1 N.D.
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