Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9687 and 9688 are separated by 1987 nucleotides9688 and 9689 are separated by 872 nucleotides9689 and 9690 are separated by 403 nucleotides9690 and 9691 are separated by 74 nucleotides mRNA_1319: 9687 - KOG0404 Thioredoxin reductase, at 918,921 to 919,455 9687 mRNA_1320: 9688 - K00384 trxB thioredoxin reductase (NADPH), at 921,443 to 923,748 9688 mRNA_1321: 9689 - K01687 ilvD dihydroxy-acid dehydratase, at 924,621 to 927,018 9689 mRNA_1322: 9690 - K11662 ACTR6, ARP6 actin-related protein 6, at 927,422 to 929,610 9690 mRNA_1323: 9691 - Hypothetical Protein, at 929,685 to 931,310 9691
Group Condition mRNA_1319 mRNA_1320 mRNA_1321 mRNA_1322 mRNA_1323
9687 9688 9689 9690 9691
auxotrophy Dropout Complete -1.2 N.D. -1.0 N.D. -0.2
auxotrophy YNB Glucose 75mM Arginine -1.0 N.D. -1.0 N.D. +0.2
auxotrophy YNB Glucose -1.0 N.D. -0.2 N.D. -0.4
facs on lipid accumulation Sorted Low BODIPY Gate -1.1 N.D. +0.5 N.D. -0.9
growth on ricinoleic acid YNB Ricinoleic Acid -1.4 N.D. +0.6 N.D. -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 N.D. -0.7 N.D. +0.1
auxotrophy YNB Glucose 75mM Methionine -0.8 N.D. -0.4 N.D. +0.3
growth on ypd YPD -0.4 N.D. -0.7 N.D. +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -1.4 N.D. +0.7 N.D. +0.1
growth on ricinoleic acid YNB Glucose -0.6 N.D. +0.4 N.D. -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.2 N.D. +0.9 N.D. -0.9
facs on lipid accumulation Sorted No BODIPY Gate +0.3 N.D. +0.1 N.D. -0.3
ypd buoyancy 40 hrs Low Buoyancy +0.1 N.D. +0.2 N.D. +0.0
growth on oleic acid YNB Glucose +0.6 N.D. -0.2 N.D. -0.1
growth on oleic acid YNB Oleic Acid +0.7 N.D. +0.3 N.D. -0.3
ypd buoyancy 40 hrs Median Buoyancy +0.3 N.D. +0.7 N.D. +0.2
ypd buoyancy 40 hrs High Buoyancy +0.7 N.D. +0.4 N.D. +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +1.0 N.D. +0.5 N.D. -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.8 N.D. +0.8 N.D. +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +1.3 N.D. +0.3 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +1.2 N.D. +1.1 N.D. -0.0
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