Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
9694 and 9695 are separated by 776 nucleotides
9695 and 9696 are separated by 325 nucleotides
9696 and 9697 are separated by 333 nucleotides
9697 and 9698 are separated by 273 nucleotides
mRNA_1326: 9694 - KOG1239 Inner membrane protein translocase involved in respiratory chain assembly, at 227 to 1,696
9694
mRNA_1327: 9695 - K14684 SLC25A23S solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41, at 2,473 to 5,541
9695
mRNA_1328: 9696 - SUPERFAMILY--SSF82708, at 5,867 to 7,721
9696
mRNA_1329: 9697 - HMMPfam-SUZ domain-PF12752,ProSiteProfiles-SUZ domain profile.-PS51673, at 8,055 to 8,960
9697
mRNA_1330: 9698 - HMMPfam-LCCL domain-PF03815,ProSiteProfiles-LCCL domain profile.-PS50820,SUPERFAMILY--SSF69848, at 9,234 to 11,606
9698
Group
Condition
mRNA
_1326
mRNA
_1327
mRNA
_1328
mRNA
_1329
mRNA
_1330
9694
9695
9696
9697
9698
growth on ricinoleic acid
YNB Methylricinoleic Acid
-2.4
-0.7
-0.2
+0.6
+0.2
growth on ricinoleic acid
YNB Glucose
-1.9
-0.7
-0.1
+0.2
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-2.1
-0.7
+0.1
+0.4
+0.4
auxotrophy
YNB Glucose
-1.6
-0.4
-0.1
+0.1
+0.2
auxotrophy
YNB Glucose 75mM Arginine
-1.4
-0.2
+0.0
-0.1
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-1.7
+0.2
+0.3
-0.2
-0.1
growth on oleic acid
YNB Oleic Acid
-1.2
-0.0
-0.2
+0.1
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.9
-0.0
-0.3
-0.1
+0.1
auxotrophy
Dropout Complete
-1.3
+0.1
+0.1
+0.0
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.9
-0.3
+0.2
+0.1
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.7
+0.2
-0.2
-0.0
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.5
+0.5
+0.5
-0.2
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.8
+0.1
+0.0
-0.2
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.9
-0.1
+0.1
-0.3
+0.4
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
-0.2
-0.6
-0.1
-0.1
growth on oleic acid
YNB Glucose
-1.1
+0.1
+0.2
+0.1
-0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.6
+0.1
+0.0
-0.2
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-1.9
+0.2
+0.4
+0.3
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.3
+0.1
-0.0
+0.0
-0.1
growth on ypd
YPD
+0.4
+0.3
+0.1
-0.1
-0.2
ypd buoyancy
40 hrs High Buoyancy
+0.9
+0.3
+0.3
-0.3
+0.4
remove
mRNA_1326
plot
remove
mRNA_1327
plot
remove
mRNA_1328
remove
mRNA_1329
plot
remove
mRNA_1330
plot