Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9696 and 9697 are separated by 333 nucleotides9697 and 9698 are separated by 273 nucleotides9698 and 9699 are separated by 362 nucleotides9699 and 9700 are separated by 562 nucleotides mRNA_1328: 9696 - SUPERFAMILY--SSF82708, at 5,867 to 7,721 9696 mRNA_1329: 9697 - HMMPfam-SUZ domain-PF12752,ProSiteProfiles-SUZ domain profile.-PS51673, at 8,055 to 8,960 9697 mRNA_1330: 9698 - HMMPfam-LCCL domain-PF03815,ProSiteProfiles-LCCL domain profile.-PS50820,SUPERFAMILY--SSF69848, at 9,234 to 11,606 9698 mRNA_1331: 9699 - KOG2273 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins, at 11,969 to 15,219 9699 mRNA_1332: 9700 - K00232 E1.3.3.6, ACOX1, ACOX3 acyl-CoA oxidase, at 15,782 to 19,108 9700
Group Condition mRNA_1328 mRNA_1329 mRNA_1330 mRNA_1331 mRNA_1332
9696 9697 9698 9699 9700
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 -0.1 -0.1 N.D. -0.1
growth on oleic acid YNB Oleic Acid -0.2 +0.1 -0.1 N.D. -0.7
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.1 +0.1 N.D. -0.2
growth on ypd YPD +0.1 -0.1 -0.2 N.D. -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.0 -0.1 N.D. -0.0
auxotrophy YNB Glucose 75mM Arginine +0.0 -0.1 +0.1 N.D. -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 +0.0 -0.1 N.D. -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 -0.2 -0.0 N.D. -0.1
auxotrophy Dropout Complete +0.1 +0.0 -0.1 N.D. -0.1
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.1 -0.1 N.D. -0.4
facs on lipid accumulation Sorted No BODIPY Gate +0.3 -0.2 -0.1 N.D. -0.1
auxotrophy YNB Glucose -0.1 +0.1 +0.2 N.D. -0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.5 -0.2 -0.2 N.D. -0.1
growth on ricinoleic acid YNB Glucose -0.1 +0.2 +0.2 N.D. -0.4
growth on oleic acid YNB Glucose +0.2 +0.1 -0.0 N.D. -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.2 +0.1 N.D. +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.3 +0.4 N.D. -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +0.6 +0.2 N.D. -0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.4 +0.4 N.D. -0.5
ypd buoyancy 40 hrs High Buoyancy +0.3 -0.3 +0.4 N.D. +0.4
facs on lipid accumulation Sorted High BODIPY Gate +0.4 +0.3 +0.3 N.D. -0.1
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