Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 9700 and 9701 are separated by 2171 nucleotides9701 and 9702 are separated by 267 nucleotides9702 and 9703 are separated by 291 nucleotides9703 and 9704 are separated by 310 nucleotides mRNA_1332: 9700 - K00232 E1.3.3.6, ACOX1, ACOX3 acyl-CoA oxidase, at 15,782 to 19,108 9700 mRNA_1333: 9701 - K08286 E2.7.11.- protein-serine/threonine kinase, at 21,280 to 24,099 9701 mRNA_1334: 9702 - HMMPfam-RNA polymerase II transcription elongation factor-PF09816, at 24,367 to 26,303 9702 mRNA_1335: 9703 - HMMPfam-Cysteine-rich TM module stress tolerance-PF12734, at 26,595 to 27,216 9703 mRNA_1336: 9704 - K01850 E5.4.99.5 chorismate mutase, at 27,527 to 28,944 9704
Group Condition mRNA_1332 mRNA_1333 mRNA_1334 mRNA_1335 mRNA_1336
9700 9701 9702 9703 9704
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 N.D. -0.6 +0.0 N.D.
growth on oleic acid YNB Oleic Acid -0.7 N.D. -0.4 +0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 N.D. -0.6 -0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.4 N.D. -0.3 -0.2 N.D.
growth on ypd YPD -0.2 N.D. -0.3 -0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.3 N.D. +0.1 -0.3 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.1 N.D. -0.4 -0.1 N.D.
auxotrophy YNB Glucose -0.2 N.D. -0.3 -0.1 N.D.
growth on ricinoleic acid YNB Glucose -0.4 N.D. +0.1 -0.2 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 N.D. -0.2 -0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.2 N.D. -0.0 -0.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.1 N.D. -0.4 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 N.D. -0.1 +0.1 N.D.
auxotrophy Dropout Complete -0.1 N.D. -0.2 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 N.D. +0.2 -0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 N.D. +0.2 -0.0 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 N.D. +0.1 +0.1 N.D.
growth on oleic acid YNB Glucose -0.2 N.D. -0.0 +0.4 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.3 N.D. +0.2 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 N.D. +0.3 +0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.4 N.D. -0.0 +0.1 N.D.
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