Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9701 and 9702 are separated by 267 nucleotides9702 and 9703 are separated by 291 nucleotides9703 and 9704 are separated by 310 nucleotides9704 and 9705 are separated by 99 nucleotides mRNA_1333: 9701 - K08286 E2.7.11.- protein-serine/threonine kinase, at 21,280 to 24,099 9701 mRNA_1334: 9702 - HMMPfam-RNA polymerase II transcription elongation factor-PF09816, at 24,367 to 26,303 9702 mRNA_1335: 9703 - HMMPfam-Cysteine-rich TM module stress tolerance-PF12734, at 26,595 to 27,216 9703 mRNA_1336: 9704 - K01850 E5.4.99.5 chorismate mutase, at 27,527 to 28,944 9704 mRNA_1337: 9705 - K17732 PMPCB, MAS1 mitochondrial-processing peptidase subunit beta, at 29,044 to 31,153 9705
Group Condition mRNA_1333 mRNA_1334 mRNA_1335 mRNA_1336 mRNA_1337
9701 9702 9703 9704 9705
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.6 -0.1 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.6 +0.0 N.D. N.D.
growth on ypd YPD N.D. -0.3 -0.3 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.4 -0.1 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. -0.3 -0.2 N.D. N.D.
auxotrophy YNB Glucose N.D. -0.3 -0.1 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.2 -0.2 N.D. N.D.
growth on oleic acid YNB Oleic Acid N.D. -0.4 +0.1 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.4 +0.1 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. +0.1 -0.3 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.0 -0.2 N.D. N.D.
growth on ricinoleic acid YNB Glucose N.D. +0.1 -0.2 N.D. N.D.
auxotrophy Dropout Complete N.D. -0.2 +0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.1 +0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.2 -0.1 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. -0.0 +0.1 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.2 -0.1 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.2 -0.0 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.1 +0.1 N.D. N.D.
growth on oleic acid YNB Glucose N.D. -0.0 +0.4 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.3 +0.2 N.D. N.D.
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