Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9704 and 9705 are separated by 99 nucleotides9705 and 9706 are separated by 469 nucleotides9706 and 9707 are separated by 408 nucleotides9707 and 9708 are separated by 120 nucleotides mRNA_1336: 9704 - K01850 E5.4.99.5 chorismate mutase, at 27,527 to 28,944 9704 mRNA_1337: 9705 - K17732 PMPCB, MAS1 mitochondrial-processing peptidase subunit beta, at 29,044 to 31,153 9705 mRNA_1338: 9706 - SUPERFAMILY--SSF52047, at 31,623 to 33,145 9706 mRNA_1339: 9707 - Hypothetical Protein, at 33,554 to 34,142 9707 mRNA_1340: 9708 - KOG3968 Atrazine chlorohydrolase/guanine deaminase, at 34,263 to 36,045 9708
Group Condition mRNA_1336 mRNA_1337 mRNA_1338 mRNA_1339 mRNA_1340
9704 9705 9706 9707 9708
auxotrophy Dropout Complete N.D. N.D. -0.3 -0.0 -0.6
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. -0.4 -0.0 -0.2
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. -0.4 -0.1 -0.1
auxotrophy YNB Glucose N.D. N.D. -0.3 +0.0 -0.2
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. -0.3 -0.1 -0.0
growth on ypd YPD N.D. N.D. -0.2 -0.3 +0.2
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. -0.3 +0.1 +0.0
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. -0.4 +0.3 +0.2
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. +0.6 -0.4 -0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. +0.3 -0.3 +0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. -0.3 +0.4 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. +0.1 +0.0 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. +0.3 +0.0 -0.0
growth on ricinoleic acid YNB Glucose N.D. N.D. -0.2 +0.3 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. +0.6 -0.3 -0.0
growth on oleic acid YNB Oleic Acid N.D. N.D. +0.1 +0.3 -0.1
growth on oleic acid YNB Glucose N.D. N.D. +0.2 +0.3 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. +0.3 -0.1 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. +0.7 -0.2 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. +0.3 +0.3 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. +0.3 +0.4 -0.0
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