Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9709 and 9710 are separated by 473 nucleotides9710 and 9711 are separated by 119 nucleotides9711 and 9712 are separated by 239 nucleotides9712 and 9713 are separated by 119 nucleotides mRNA_1341: 9709 - SUPERFAMILY--SSF52047, at 37,179 to 38,782 9709 mRNA_1342: 9710 - SUPERFAMILY--SSF52047, at 39,256 to 40,650 9710 mRNA_1343: 9711 - K00698 CHS1 chitin synthase, at 40,770 to 45,014 9711 mRNA_1344: 9712 - K06063 SNW1, SKIIP, SKIP SNW domain-containing protein 1, at 45,254 to 47,593 9712 mRNA_1345: 9713 - KOG2533 Permease of the major facilitator superfamily, at 47,713 to 50,221 9713
Group Condition mRNA_1341 mRNA_1342 mRNA_1343 mRNA_1344 mRNA_1345
9709 9710 9711 9712 9713
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.4 +0.2 N.D. +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.0 +0.0 N.D. +0.1
growth on oleic acid YNB Oleic Acid +0.1 +0.1 -0.0 N.D. -0.2
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.3 -0.1 N.D. -0.2
growth on ypd YPD -0.2 +0.1 +0.2 N.D. +0.1
auxotrophy YNB Glucose 75mM Arginine +0.3 +0.2 -0.1 N.D. -0.2
auxotrophy Dropout Complete +0.1 +0.4 -0.1 N.D. -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.4 +0.5 -0.0 N.D. +0.3
auxotrophy YNB Glucose +0.0 +0.5 -0.1 N.D. -0.1
growth on oleic acid YNB Glucose +0.1 +0.4 +0.1 N.D. -0.2
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.2 -0.0 N.D. +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 +0.5 +0.0 N.D. +0.0
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.1 +0.1 N.D. +0.2
growth on ricinoleic acid YNB Glucose +0.4 +0.1 -0.1 N.D. +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 +0.6 +0.2 N.D. +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 +0.7 +0.2 N.D. -0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.3 +0.1 N.D. +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 +0.7 +0.1 N.D. +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 +0.1 +0.0 N.D. +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 +0.4 -0.0 N.D. +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.7 +0.0 N.D. +0.1
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