Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9710 and 9711 are separated by 119 nucleotides9711 and 9712 are separated by 239 nucleotides9712 and 9713 are separated by 119 nucleotides9713 and 9714 are separated by 265 nucleotides mRNA_1342: 9710 - SUPERFAMILY--SSF52047, at 39,256 to 40,650 9710 mRNA_1343: 9711 - K00698 CHS1 chitin synthase, at 40,770 to 45,014 9711 mRNA_1344: 9712 - K06063 SNW1, SKIIP, SKIP SNW domain-containing protein 1, at 45,254 to 47,593 9712 mRNA_1345: 9713 - KOG2533 Permease of the major facilitator superfamily, at 47,713 to 50,221 9713 mRNA_1346: 9714 - Hypothetical Protein, at 50,487 to 51,327 9714
Group Condition mRNA_1342 mRNA_1343 mRNA_1344 mRNA_1345 mRNA_1346
9710 9711 9712 9713 9714
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 +0.2 N.D. +0.1 -0.8
auxotrophy YNB Glucose 75mM Arginine +0.2 -0.1 N.D. -0.2 -0.5
auxotrophy YNB Glucose 75mM Methionine +0.3 -0.1 N.D. -0.2 -0.4
growth on ricinoleic acid YNB Glucose +0.1 -0.1 N.D. +0.1 -0.1
growth on oleic acid YNB Oleic Acid +0.1 -0.0 N.D. -0.2 +0.1
growth on ypd YPD +0.1 +0.2 N.D. +0.1 -0.3
ypd buoyancy 40 hrs Low Buoyancy +0.0 +0.0 N.D. +0.1 +0.1
auxotrophy YNB Glucose +0.5 -0.1 N.D. -0.1 -0.1
auxotrophy Dropout Complete +0.4 -0.1 N.D. -0.0 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.7 +0.1 N.D. +0.1 -0.5
growth on oleic acid YNB Glucose +0.4 +0.1 N.D. -0.2 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.6 +0.2 N.D. +0.2 -0.4
facs on lipid accumulation Sorted No BODIPY Gate +0.5 -0.0 N.D. +0.3 -0.0
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.0 N.D. +0.2 +0.5
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 -0.0 N.D. +0.1 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 +0.0 N.D. +0.0 +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.1 N.D. +0.2 +0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.7 +0.2 N.D. -0.0 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.0 N.D. +0.2 +0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.7 +0.0 N.D. +0.1 +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.3 +0.1 N.D. +0.4 +0.3
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