Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9714 and 9715 are separated by 1383 nucleotides9715 and 9716 are separated by 1024 nucleotides9716 and 9717 are separated by 394 nucleotides9717 and 9718 are separated by 238 nucleotides mRNA_1346: 9714 - Hypothetical Protein, at 50,487 to 51,327 9714 mRNA_1347: 9715 - Hypothetical Protein, at 52,711 to 53,943 9715 mRNA_1348: 9716 - SUPERFAMILY--SSF52047, at 54,968 to 55,797 9716 mRNA_1349: 9717 - K12852 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component, at 56,192 to 59,943 9717 mRNA_1350: 9718 - KOG3376 Uncharacterized conserved protein, at 60,182 to 60,785 9718
Group Condition mRNA_1346 mRNA_1347 mRNA_1348 mRNA_1349 mRNA_1350
9714 9715 9716 9717 9718
ypd buoyancy 40 hrs No Buoyancy Separation -0.8 -0.5 +0.2 N.D. -0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 -0.1 -0.5 N.D. +0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 +0.7 +0.1 N.D. -1.3
ypd buoyancy 40 hrs High Buoyancy +0.5 -0.6 +0.1 N.D. -0.7
auxotrophy YNB Glucose 75mM Arginine -0.5 -0.2 +0.3 N.D. -0.2
auxotrophy YNB Glucose 75mM Methionine -0.4 +0.0 +0.1 N.D. -0.1
auxotrophy YNB Glucose -0.1 +0.2 +0.2 N.D. -0.4
growth on ypd YPD -0.3 -0.2 +0.2 N.D. +0.5
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.7 -0.1 N.D. -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +0.1 -0.2 N.D. +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.5 +0.4 +0.2 N.D. -0.7
auxotrophy Dropout Complete +0.0 -0.2 +0.3 N.D. +0.3
growth on ricinoleic acid YNB Glucose -0.1 -0.2 +0.5 N.D. +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.3 -0.2 N.D. +0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.3 +0.2 +0.5 N.D. -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.5 -0.4 N.D. +0.7
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 -0.4 +0.4 N.D. +0.6
growth on oleic acid YNB Glucose +0.2 +0.0 +0.1 N.D. +0.7
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.3 +0.4 N.D. +0.4
growth on ricinoleic acid YNB Ricinoleic Acid +0.7 +0.0 +0.5 N.D. +0.4
growth on oleic acid YNB Oleic Acid +0.1 +0.2 +0.3 N.D. +1.1
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