Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9720 and 9721 are separated by 879 nucleotides9721 and 9722 are separated by 52 nucleotides9722 and 9723 are separated by 995 nucleotides9723 and 9724 are separated by 1196 nucleotides mRNA_1352: 9720 - Hypothetical Protein, at 66,471 to 67,100 9720 mRNA_1353: 9721 - HMMPfam-Starch binding domain-PF00686,ProSiteProfiles-CBM20 (carbohydrate binding type-20) domain profile.-PS51166,SMART-Starch binding domain-SM01065,SUPERFAMILY--SSF49452, at 67,980 to 69,503 9721 mRNA_1354: 9722 - Hypothetical Protein, at 69,556 to 71,202 9722 mRNA_1355: 9723 - SUPERFAMILY--SSF50685, at 72,198 to 73,021 9723 mRNA_1356: 9724 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 74,218 to 78,285 9724
Group Condition mRNA_1352 mRNA_1353 mRNA_1354 mRNA_1355 mRNA_1356
9720 9721 9722 9723 9724
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.3 -0.2 -0.1 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.8 +0.0 -0.1 +0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.4 -0.2 -0.0 +0.1 -0.1
growth on ypd YPD -0.5 +0.3 -0.0 -0.0 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.6 +0.3 +0.1 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 -0.0 +0.0 -0.3 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.4 +0.0 -0.1 +0.0 +0.2
growth on ricinoleic acid YNB Glucose -0.5 -0.2 +0.2 +0.2 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.4 +0.0 +0.4 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.2 +0.0 -0.0 +0.1 -0.1
auxotrophy YNB Glucose -0.3 +0.0 +0.0 +0.1 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.3 +0.2 +0.1 -0.0 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -0.3 +0.0 +0.3 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.1 -0.0 +0.2 +0.1
auxotrophy Dropout Complete +0.1 -0.0 -0.0 +0.0 +0.2
growth on oleic acid YNB Oleic Acid +0.4 +0.0 -0.0 +0.1 +0.0
growth on oleic acid YNB Glucose +0.1 +0.0 +0.1 +0.4 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.0 -0.0 +0.2 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.2 -0.1 +0.2 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.5 -0.1 +0.4 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.3 -0.0 +0.6 +0.4
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