Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9721 and 9722 are separated by 52 nucleotides9722 and 9723 are separated by 995 nucleotides9723 and 9724 are separated by 1196 nucleotides9724 and 9725 are separated by 1229 nucleotides mRNA_1353: 9721 - HMMPfam-Starch binding domain-PF00686,ProSiteProfiles-CBM20 (carbohydrate binding type-20) domain profile.-PS51166,SMART-Starch binding domain-SM01065,SUPERFAMILY--SSF49452, at 67,980 to 69,503 9721 mRNA_1354: 9722 - Hypothetical Protein, at 69,556 to 71,202 9722 mRNA_1355: 9723 - SUPERFAMILY--SSF50685, at 72,198 to 73,021 9723 mRNA_1356: 9724 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 74,218 to 78,285 9724 mRNA_1357: 9725 - BLAST ATP-citrate synthase [Microbotryum lychnidis-dioicae ..., at 79,515 to 80,146 9725
Group Condition mRNA_1353 mRNA_1354 mRNA_1355 mRNA_1356 mRNA_1357
9721 9722 9723 9724 9725
ypd buoyancy 40 hrs No Buoyancy Separation -0.8 +0.0 -0.1 +0.3 -0.6
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.2 -0.1 +0.0 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 +0.0 -0.3 -0.1 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.0 +0.1 -0.1 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.6 +0.3 +0.1 -0.2 +0.2
auxotrophy YNB Glucose 75mM Arginine +0.0 -0.1 +0.0 +0.2 -0.1
auxotrophy YNB Glucose +0.0 +0.0 +0.1 +0.1 -0.2
growth on ypd YPD +0.3 -0.0 -0.0 -0.3 +0.1
auxotrophy Dropout Complete -0.0 -0.0 +0.0 +0.2 -0.2
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.0 +0.1 -0.1 +0.1
growth on ricinoleic acid YNB Glucose -0.2 +0.2 +0.2 +0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.0 +0.2 +0.1 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 +0.0 +0.4 -0.1 +0.4
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.1 -0.0 +0.1 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 +0.0 +0.3 +0.1 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 -0.1 +0.4 +0.2 -0.5
growth on oleic acid YNB Oleic Acid +0.0 -0.0 +0.1 +0.0 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 -0.0 +0.2 +0.3 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 -0.1 +0.2 +0.3 +0.2
growth on oleic acid YNB Glucose +0.0 +0.1 +0.4 -0.0 +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 -0.0 +0.6 +0.4 +0.4
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