Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9734 and 9735 are separated by 351 nucleotides9735 and 9736 are separated by 281 nucleotides9736 and 9737 are separated by 176 nucleotides9737 and 9738 are separated by 253 nucleotides mRNA_1366: 9734 - K00661 maa maltose O-acetyltransferase, at 105,397 to 106,460 9734 mRNA_1367: 9735 - K03233 EEF1G elongation factor 1-gamma, at 106,812 to 108,790 9735 mRNA_1368: 9736 - K03233 EEF1G elongation factor 1-gamma, at 109,072 to 110,968 9736 mRNA_1369: 9737 - HMMPfam-Glutathione S-transferase, N-terminal domain-PF13417,ProSiteProfiles-Soluble glutathione S-transferase N-terminal domain profile.-PS50404,ProSiteProfiles-Soluble glutathione S-transferase C-terminal domain profile.-PS50405,SUPERFAMILY--SSF52833, at 111,145 to 112,135 9737 mRNA_1370: 9738 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 112,389 to 113,571 9738
Group Condition mRNA_1366 mRNA_1367 mRNA_1368 mRNA_1369 mRNA_1370
9734 9735 9736 9737 9738
growth on oleic acid YNB Oleic Acid -0.1 +0.2 -0.1 -1.0 -0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -0.3 -0.1 +0.1 -0.1
growth on oleic acid YNB Glucose -0.0 +0.4 -0.0 -1.0 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -0.4 -0.0 -0.5 +0.2
auxotrophy YNB Glucose 75mM Methionine -0.0 +0.1 +0.1 -0.6 -0.1
auxotrophy Dropout Complete -0.1 -0.6 +0.2 -0.2 +0.1
auxotrophy YNB Glucose -0.2 -0.3 +0.3 -0.4 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 -0.1 +0.0 -0.3 -0.1
growth on ypd YPD +0.1 -0.2 +0.3 -0.5 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 +0.0 -0.3 -0.2 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.2 +0.3 -0.5 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.0 +0.3 -0.2 +0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.4 -0.1 +0.0 +0.2 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.3 +0.2 +0.1 +0.4 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.3 -0.0 +0.5 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.5 +0.5 +0.3 -0.4 -0.0
growth on ricinoleic acid YNB Glucose +1.1 +0.3 +0.5 -0.8 +0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 +0.4 +0.3 +0.8 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.7 +0.2 +0.6 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 +0.9 +0.4 -0.5 +0.6
growth on ricinoleic acid YNB Methylricinoleic Acid +0.6 +1.2 +0.8 -0.8 +0.6
remove
mRNA_1366
plot
remove
mRNA_1367
plot
remove
mRNA_1368
remove
mRNA_1369
plot
remove
mRNA_1370
plot