Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9737 and 9738 are separated by 253 nucleotides9738 and 9739 are separated by 486 nucleotides9739 and 9740 are separated by 334 nucleotides9740 and 9741 are separated by 414 nucleotides mRNA_1369: 9737 - HMMPfam-Glutathione S-transferase, N-terminal domain-PF13417,ProSiteProfiles-Soluble glutathione S-transferase N-terminal domain profile.-PS50404,ProSiteProfiles-Soluble glutathione S-transferase C-terminal domain profile.-PS50405,SUPERFAMILY--SSF52833, at 111,145 to 112,135 9737 mRNA_1370: 9738 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 112,389 to 113,571 9738 mRNA_1371: 9739 - KOG3024 Uncharacterized conserved protein, at 114,058 to 115,447 9739 mRNA_1372: 9740 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 115,782 to 116,339 9740 mRNA_1373: 9741 - K05661 ABCB6 ATP-binding cassette, subfamily B (MDR/TAP), member 6, at 116,754 to 120,065 9741
Group Condition mRNA_1369 mRNA_1370 mRNA_1371 mRNA_1372 mRNA_1373
9737 9738 9739 9740 9741
growth on oleic acid YNB Glucose -1.0 +0.0 -1.1 +0.1 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.6 -0.1 -1.4 +0.4 -0.1
auxotrophy YNB Glucose -0.4 +0.1 -1.7 +0.5 +0.0
growth on oleic acid YNB Oleic Acid -1.0 -0.0 -0.1 -0.3 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 +0.2 -0.7 +0.0 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.1 -0.5 -0.2 -0.2
growth on ricinoleic acid YNB Glucose -0.8 +0.3 -1.0 +0.2 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 -0.0 +0.1 -0.5 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 +0.6 -1.3 +0.4 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.0 -1.3 +0.6 -0.0
auxotrophy Dropout Complete -0.2 +0.1 -0.8 +0.3 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.8 +0.1 -1.6 -0.0 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5 +0.1 -0.5 +0.5 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 +0.3 -0.5 -0.1 +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -0.1 -0.4 -0.1 +0.0
ypd buoyancy 40 hrs Median Buoyancy +0.4 +0.1 -0.8 +0.1 +0.1
growth on ypd YPD -0.5 +0.2 +0.4 -0.4 +0.3
ypd buoyancy 40 hrs High Buoyancy +0.6 -0.1 -0.6 -0.1 +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.5 +0.1 -0.0 -0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.0 +0.2 +0.2 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.8 +0.6 -0.2 +0.7 +0.2
remove
mRNA_1369
plot
remove
mRNA_1370
plot
remove
mRNA_1371
remove
mRNA_1372
plot
remove
mRNA_1373
plot