Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9742 and 9743 are separated by 610 nucleotides9743 and 9744 are separated by 329 nucleotides9744 and 9745 are separated by 377 nucleotides9745 and 9746 are separated by 410 nucleotides mRNA_1374: 9742 - K01733 thrC threonine synthase, at 121,119 to 123,367 9742 mRNA_1375: 9743 - K08139 HXT MFS transporter, SP family, sugar-H+ symporter, at 123,978 to 126,769 9743 mRNA_1376: 9744 - HMMPfam-Helix-loop-helix DNA-binding domain-PF00010,ProSiteProfiles-Myc-type, basic helix-loop-helix (bHLH) domain profile.-PS50888,SUPERFAMILY--SSF47459, at 127,099 to 128,886 9744 mRNA_1377: 9745 - Hypothetical Protein, at 129,264 to 129,958 9745 mRNA_1378: 9746 - KOG2214 Predicted esterase of the alpha-beta hydrolase superfamily, at 130,369 to 133,964 9746
Group Condition mRNA_1374 mRNA_1375 mRNA_1376 mRNA_1377 mRNA_1378
9742 9743 9744 9745 9746
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.2 -1.2 +0.1 -0.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.2 -0.2 -0.5 -0.2
growth on oleic acid YNB Oleic Acid N.D. -0.3 -1.2 +0.2 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.1 -0.0 -0.0 -0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.2 -0.2 -0.1 -0.0
auxotrophy YNB Glucose 75mM Methionine N.D. +0.1 -0.2 -0.3 +0.1
ypd buoyancy 40 hrs High Buoyancy N.D. -0.1 +0.1 -0.1 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.3 -0.5 +0.6 -0.0
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.1 -0.3 +0.3 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.1 -0.2 -0.1 +0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.0 +0.1 +0.1 -0.2
growth on oleic acid YNB Glucose N.D. -0.2 -0.1 +0.3 +0.0
auxotrophy YNB Glucose N.D. +0.0 +0.1 -0.3 +0.1
auxotrophy YNB Glucose 75mM Arginine N.D. +0.2 +0.0 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.0 -0.1 +0.1 +0.2
growth on ypd YPD N.D. +0.2 +0.1 -0.0 +0.0
auxotrophy Dropout Complete N.D. +0.0 +0.3 -0.3 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.4 -0.0 -0.0 +0.0
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.2 +0.5 -0.5 +0.2
growth on ricinoleic acid YNB Glucose N.D. +0.2 +0.0 -0.0 +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.4 +0.0 +0.2 +0.3
remove
mRNA_1374
plot
remove
mRNA_1375
plot
remove
mRNA_1376
remove
mRNA_1377
plot
remove
mRNA_1378
plot