Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9743 and 9744 are separated by 329 nucleotides9744 and 9745 are separated by 377 nucleotides9745 and 9746 are separated by 410 nucleotides9746 and 9747 are separated by 112 nucleotides mRNA_1375: 9743 - K08139 HXT MFS transporter, SP family, sugar-H+ symporter, at 123,978 to 126,769 9743 mRNA_1376: 9744 - HMMPfam-Helix-loop-helix DNA-binding domain-PF00010,ProSiteProfiles-Myc-type, basic helix-loop-helix (bHLH) domain profile.-PS50888,SUPERFAMILY--SSF47459, at 127,099 to 128,886 9744 mRNA_1377: 9745 - Hypothetical Protein, at 129,264 to 129,958 9745 mRNA_1378: 9746 - KOG2214 Predicted esterase of the alpha-beta hydrolase superfamily, at 130,369 to 133,964 9746 mRNA_1379: 9747 - HMMPfam-Ubiquitin-2 like Rad60 SUMO-like-PF11976,SUPERFAMILY--SSF54236, at 134,077 to 136,225 9747
Group Condition mRNA_1375 mRNA_1376 mRNA_1377 mRNA_1378 mRNA_1379
9743 9744 9745 9746 9747
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -1.2 +0.1 -0.0 -0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.2 -0.5 -0.2 -0.1
growth on oleic acid YNB Oleic Acid -0.3 -1.2 +0.2 +0.2 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.2 -0.1 -0.0 -0.3
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.2 -0.3 +0.1 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.0 -0.0 -0.6 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.2 -0.1 +0.1 -0.3
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.3 +0.3 -0.2 +0.0
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.1 -0.1 -0.1 +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +0.5 -0.5 +0.2 -0.4
auxotrophy YNB Glucose +0.0 +0.1 -0.3 +0.1 -0.0
growth on oleic acid YNB Glucose -0.2 -0.1 +0.3 +0.0 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.0 -0.1 +0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.1 +0.1 -0.2 +0.2
growth on ypd YPD +0.2 +0.1 -0.0 +0.0 -0.0
auxotrophy Dropout Complete +0.0 +0.3 -0.3 +0.2 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 -0.1 +0.1 +0.2 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.5 +0.6 -0.0 +0.5
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 -0.0 -0.0 +0.0 +0.2
growth on ricinoleic acid YNB Glucose +0.2 +0.0 -0.0 +0.4 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 +0.0 +0.2 +0.3 -0.1
remove
mRNA_1375
plot
remove
mRNA_1376
plot
remove
mRNA_1377
remove
mRNA_1378
plot
remove
mRNA_1379
plot