Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9745 and 9746 are separated by 410 nucleotides9746 and 9747 are separated by 112 nucleotides9747 and 9748 are separated by 602 nucleotides9748 and 9749 are separated by 172 nucleotides mRNA_1377: 9745 - Hypothetical Protein, at 129,264 to 129,958 9745 mRNA_1378: 9746 - KOG2214 Predicted esterase of the alpha-beta hydrolase superfamily, at 130,369 to 133,964 9746 mRNA_1379: 9747 - HMMPfam-Ubiquitin-2 like Rad60 SUMO-like-PF11976,SUPERFAMILY--SSF54236, at 134,077 to 136,225 9747 mRNA_1380: 9748 - K02155 ATPeV0C, ATP6L V-type H+-transporting ATPase 16kDa proteolipid subunit, at 136,828 to 138,135 9748 mRNA_1381: 9749 - Hypothetical Protein, at 138,308 to 139,656 9749
Group Condition mRNA_1377 mRNA_1378 mRNA_1379 mRNA_1380 mRNA_1381
9745 9746 9747 9748 9749
facs on lipid accumulation Sorted No BODIPY Gate -0.5 -0.2 -0.1 N.D. -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.5 +0.2 -0.4 N.D. +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.0 -0.3 N.D. -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.6 +0.2 N.D. -0.0
auxotrophy YNB Glucose 75mM Methionine -0.3 +0.1 -0.3 N.D. +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -0.0 -0.4 N.D. -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.1 -0.3 N.D. +0.1
growth on ypd YPD -0.0 +0.0 -0.0 N.D. -0.2
auxotrophy Dropout Complete -0.3 +0.2 -0.1 N.D. -0.0
auxotrophy YNB Glucose -0.3 +0.1 -0.0 N.D. +0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.1 -0.1 N.D. +0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.1 +0.2 N.D. +0.0
ypd buoyancy 40 hrs Low Buoyancy +0.3 -0.2 +0.0 N.D. -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.2 +0.2 N.D. -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 +0.0 +0.2 N.D. -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.2 +0.1 N.D. -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 +0.3 -0.1 N.D. -0.1
growth on oleic acid YNB Oleic Acid +0.2 +0.2 +0.1 N.D. -0.1
growth on oleic acid YNB Glucose +0.3 +0.0 +0.1 N.D. -0.0
growth on ricinoleic acid YNB Glucose -0.0 +0.4 -0.0 N.D. +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.6 -0.0 +0.5 N.D. +0.6
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