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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9746 and 9747 are separated by 112 nucleotides
9747 and 9748 are separated by 602 nucleotides
9748 and 9749 are separated by 172 nucleotides
9749 and 9750 are separated by 194 nucleotides
mRNA_1378: 9746 - KOG2214 Predicted esterase of the alpha-beta hydrolase superfamily, at 130,369 to 133,964
9746
mRNA_1379: 9747 - HMMPfam-Ubiquitin-2 like Rad60 SUMO-like-PF11976,SUPERFAMILY--SSF54236, at 134,077 to 136,225
9747
mRNA_1380: 9748 - K02155 ATPeV0C, ATP6L V-type H+-transporting ATPase 16kDa proteolipid subunit, at 136,828 to 138,135
9748
mRNA_1381: 9749 - Hypothetical Protein, at 138,308 to 139,656
9749
mRNA_1382: 9750 - K11805 WDR68, HAN11 WD repeat-containing protein 68, at 139,851 to 141,572
9750
Group
Condition
mRNA
_1378
mRNA
_1379
mRNA
_1380
mRNA
_1381
mRNA
_1382
9746
9747
9748
9749
9750
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
-0.3
N.D.
-0.2
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-0.1
N.D.
-0.2
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-0.3
N.D.
+0.1
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
-0.4
N.D.
+0.0
-0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.0
N.D.
-0.1
+0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.1
-0.3
N.D.
+0.1
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.0
+0.2
N.D.
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
+0.1
N.D.
-0.1
+0.0
growth on oleic acid
YNB Oleic Acid
+0.2
+0.1
N.D.
-0.1
-0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.2
+0.2
N.D.
-0.1
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
-0.4
N.D.
-0.0
+0.6
growth on oleic acid
YNB Glucose
+0.0
+0.1
N.D.
-0.0
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
-0.1
N.D.
-0.1
+0.1
growth on ypd
YPD
+0.0
-0.0
N.D.
-0.2
+0.4
auxotrophy
YNB Glucose 75mM Arginine
+0.1
-0.1
N.D.
+0.1
+0.1
ypd buoyancy
40 hrs High Buoyancy
-0.1
+0.2
N.D.
+0.0
+0.1
auxotrophy
YNB Glucose
+0.1
-0.0
N.D.
+0.1
+0.3
auxotrophy
Dropout Complete
+0.2
-0.1
N.D.
-0.0
+0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.6
+0.2
N.D.
-0.0
+1.0
growth on ricinoleic acid
YNB Glucose
+0.4
-0.0
N.D.
+0.1
+0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
+0.5
N.D.
+0.6
-0.2
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