Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9747 and 9748 are separated by 602 nucleotides9748 and 9749 are separated by 172 nucleotides9749 and 9750 are separated by 194 nucleotides9750 and 9751 are separated by 442 nucleotides mRNA_1379: 9747 - HMMPfam-Ubiquitin-2 like Rad60 SUMO-like-PF11976,SUPERFAMILY--SSF54236, at 134,077 to 136,225 9747 mRNA_1380: 9748 - K02155 ATPeV0C, ATP6L V-type H+-transporting ATPase 16kDa proteolipid subunit, at 136,828 to 138,135 9748 mRNA_1381: 9749 - Hypothetical Protein, at 138,308 to 139,656 9749 mRNA_1382: 9750 - K11805 WDR68, HAN11 WD repeat-containing protein 68, at 139,851 to 141,572 9750 mRNA_1383: 9751 - HMMPfam-Nse4 C-terminal-PF08743,HMMPfam-Binding domain of Nse4/EID3 to Nse3-MAGE-PF15412, at 142,015 to 143,615 9751
Group Condition mRNA_1379 mRNA_1380 mRNA_1381 mRNA_1382 mRNA_1383
9747 9748 9749 9750 9751
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 N.D. -0.2 -0.0 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.4 N.D. +0.0 -0.0 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 N.D. +0.1 -0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.1 N.D. -0.2 +0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.3 N.D. +0.1 +0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 N.D. -0.1 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 N.D. -0.1 +0.0 N.D.
growth on oleic acid YNB Oleic Acid +0.1 N.D. -0.1 -0.0 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 N.D. -0.1 -0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.0 N.D. -0.1 +0.2 N.D.
growth on oleic acid YNB Glucose +0.1 N.D. -0.0 +0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 N.D. -0.0 +0.6 N.D.
growth on ypd YPD -0.0 N.D. -0.2 +0.4 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.1 N.D. +0.1 +0.1 N.D.
auxotrophy Dropout Complete -0.1 N.D. -0.0 +0.4 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.2 N.D. -0.1 +0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.2 N.D. +0.0 +0.1 N.D.
auxotrophy YNB Glucose -0.0 N.D. +0.1 +0.3 N.D.
growth on ricinoleic acid YNB Glucose -0.0 N.D. +0.1 +0.3 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.5 N.D. +0.6 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 N.D. -0.0 +1.0 N.D.
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