Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9751 and 9752 are separated by 185 nucleotides9752 and 9753 are separated by 453 nucleotides9753 and 9754 are separated by 657 nucleotides9754 and 9755 are separated by 195 nucleotides mRNA_1383: 9751 - HMMPfam-Nse4 C-terminal-PF08743,HMMPfam-Binding domain of Nse4/EID3 to Nse3-MAGE-PF15412, at 142,015 to 143,615 9751 mRNA_1384: 9752 - KOG4472 Glycolipid 2-alpha-mannosyltransferase (alpha-1,2-mannosyltransferase), at 143,801 to 145,438 9752 mRNA_1385: 9753 - K06966 K06966 uncharacterized protein, at 145,892 to 146,941 9753 mRNA_1386: 9754 - K06966 K06966 uncharacterized protein, at 147,599 to 148,550 9754 mRNA_1387: 9755 - BLAST bromodomain-containing protein 8 [Cryptococcus ne..., at 148,746 to 149,519 9755
Group Condition mRNA_1383 mRNA_1384 mRNA_1385 mRNA_1386 mRNA_1387
9751 9752 9753 9754 9755
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -1.1 -0.6 -0.4 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.3 +0.2 -0.5 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.1 +0.1 -0.8 +0.3
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.1 +0.0 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.8 +0.3 +0.2 +0.2
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.2 +0.3 -0.4 -0.1
growth on ypd YPD N.D. -0.4 +0.2 +0.4 -0.1
growth on oleic acid YNB Glucose N.D. +0.2 +0.1 -0.2 +0.0
growth on oleic acid YNB Oleic Acid N.D. +0.1 +0.2 -0.3 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.9 +0.0 -0.6 -0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.8 -0.2 -0.4 +0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.4 +0.1 -0.1 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.3 +0.6 -0.2 +0.5
ypd buoyancy 40 hrs High Buoyancy N.D. +0.3 +0.2 +0.1 +0.1
auxotrophy Dropout Complete N.D. +0.4 -0.1 +0.2 +0.1
growth on ricinoleic acid YNB Glucose N.D. +0.6 +0.1 -0.0 +0.2
auxotrophy YNB Glucose 75mM Methionine N.D. +0.1 +0.5 +0.6 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.7 +0.3 +0.3 +0.4
auxotrophy YNB Glucose N.D. +0.7 +0.2 +0.6 +0.1
auxotrophy YNB Glucose 75mM Arginine N.D. +0.7 +0.5 +0.5 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.9 +0.5 -0.0 +0.5
remove
mRNA_1383
plot
remove
mRNA_1384
plot
remove
mRNA_1385
remove
mRNA_1386
plot
remove
mRNA_1387
plot