Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9754 and 9755 are separated by 195 nucleotides9755 and 9756 are separated by 629 nucleotides9756 and 9757 are separated by 1043 nucleotides9757 and 9758 are separated by 406 nucleotides mRNA_1386: 9754 - K06966 K06966 uncharacterized protein, at 147,599 to 148,550 9754 mRNA_1387: 9755 - BLAST bromodomain-containing protein 8 [Cryptococcus ne..., at 148,746 to 149,519 9755 mRNA_1388: 9756 - K00698 CHS1 chitin synthase, at 150,149 to 154,291 9756 mRNA_1389: 9757 - Hypothetical Protein, at 155,335 to 156,152 9757 mRNA_1390: 9758 - KOG0988 RNA-directed RNA polymerase QDE-1 required for posttranscriptional gene silencing and RNA interference, at 156,559 to 159,898 9758
Group Condition mRNA_1386 mRNA_1387 mRNA_1388 mRNA_1389 mRNA_1390
9754 9755 9756 9757 9758
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.8 +0.3 +0.2 -0.2 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.4 -0.1 -0.1 -0.2 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.3 +0.1 -0.1 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 -0.1 +0.3 +0.2 -0.3
growth on oleic acid YNB Glucose -0.2 +0.0 -0.1 +0.1 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.1 -0.1 +0.2 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.4 +0.2 +0.1 +0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.0 -0.0 -0.1 +0.2
growth on oleic acid YNB Oleic Acid -0.3 +0.3 -0.0 +0.2 -0.1
growth on ricinoleic acid YNB Glucose -0.0 +0.2 -0.1 +0.0 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 +0.3 +0.1 +0.1 +0.3
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.1 -0.1 +0.0 +0.1
growth on ypd YPD +0.4 -0.1 -0.3 +0.2 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 +0.5 +0.1 -0.1 -0.0
auxotrophy Dropout Complete +0.2 +0.1 +0.0 +0.0 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.2 +0.2 -0.1 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.5 +0.1 -0.0 +0.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 +0.4 -0.0 -0.0 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 +0.5 -0.1 +0.3 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.6 +0.2 +0.0 +0.1 -0.0
auxotrophy YNB Glucose +0.6 +0.1 -0.0 +0.1 +0.3
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