Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9755 and 9756 are separated by 629 nucleotides9756 and 9757 are separated by 1043 nucleotides9757 and 9758 are separated by 406 nucleotides9758 and 9759 are separated by 192 nucleotides mRNA_1387: 9755 - BLAST bromodomain-containing protein 8 [Cryptococcus ne..., at 148,746 to 149,519 9755 mRNA_1388: 9756 - K00698 CHS1 chitin synthase, at 150,149 to 154,291 9756 mRNA_1389: 9757 - Hypothetical Protein, at 155,335 to 156,152 9757 mRNA_1390: 9758 - KOG0988 RNA-directed RNA polymerase QDE-1 required for posttranscriptional gene silencing and RNA interference, at 156,559 to 159,898 9758 mRNA_1391: 9759 - HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112, at 160,091 to 161,111 9759
Group Condition mRNA_1387 mRNA_1388 mRNA_1389 mRNA_1390 mRNA_1391
9755 9756 9757 9758 9759
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 +0.2 -0.2 -0.2 -1.8
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.2 -0.1 +0.1 -1.0
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.1 +0.2 -0.3 -0.4
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.0 +0.1 -0.0 -0.8
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 +0.1 -0.1 +0.2 -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.1 -0.2 +0.2 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.3 +0.2 -0.3 -0.3
growth on oleic acid YNB Glucose +0.0 -0.1 +0.1 -0.3 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 +0.1 -0.1 -0.0 -0.5
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.0 +0.1 -0.1 -0.1
growth on ricinoleic acid YNB Glucose +0.2 -0.1 +0.0 +0.1 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 -0.0 -0.0 +0.0 -0.3
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.0 -0.1 +0.2 +0.2
auxotrophy Dropout Complete +0.1 +0.0 +0.0 -0.0 +0.2
growth on ypd YPD -0.1 -0.3 +0.2 +0.1 +0.5
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.1 +0.0 +0.1 +0.2
auxotrophy YNB Glucose +0.1 -0.0 +0.1 +0.3 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.1 +0.1 -0.1 +0.1
growth on oleic acid YNB Oleic Acid +0.3 -0.0 +0.2 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 +0.1 +0.1 +0.3 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 -0.1 +0.3 +0.1 +0.2
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