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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9761 and 9762 are separated by 12 nucleotides
9762 and 9763 are separated by 1490 nucleotides
9763 and 9764 are separated by 1472 nucleotides
9764 and 9765 are separated by 278 nucleotides
mRNA_1393: 9761 - Hypothetical Protein, at 163,263 to 164,488
9761
mRNA_1394: 9762 - K04907 KCNH4 potassium voltage-gated channel Eag-related subfamily H member 4, at 164,501 to 165,028
9762
mRNA_1395: 9763 - K07756 IP6K, IHPK inositol-hexakisphosphate 5-kinase, at 166,519 to 170,946
9763
mRNA_1396: 9764 - Hypothetical Protein, at 172,419 to 173,406
9764
mRNA_1397: 9765 - K03242 EIF2S3 translation initiation factor 2 subunit 3, at 173,685 to 176,206
9765
Group
Condition
mRNA
_1393
mRNA
_1394
mRNA
_1395
mRNA
_1396
mRNA
_1397
9761
9762
9763
9764
9765
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.7
+0.4
-0.4
-0.9
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.2
+0.7
-0.5
+0.0
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
-0.6
-0.5
+0.1
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
+0.6
-0.5
-0.8
N.D.
growth on oleic acid
YNB Oleic Acid
-0.9
+0.3
+0.3
-0.3
N.D.
growth on oleic acid
YNB Glucose
-0.5
+0.2
-0.0
-0.2
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.2
-0.1
+0.2
+0.0
N.D.
growth on ypd
YPD
-0.1
+0.6
-0.3
-0.2
N.D.
ypd buoyancy
40 hrs High Buoyancy
+0.4
-0.5
+0.0
+0.3
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
+0.5
-0.4
-0.1
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.5
+0.6
+0.0
+0.4
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+1.4
+0.4
-0.2
-0.9
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.2
+0.8
+0.1
-0.0
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
+1.6
+0.6
+0.0
-1.6
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.5
+0.2
+0.1
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
+0.8
-0.1
+0.0
N.D.
auxotrophy
YNB Glucose
+0.0
+0.6
+0.1
+0.6
N.D.
growth on ricinoleic acid
YNB Glucose
+1.2
+0.5
-0.2
-0.2
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+1.7
+0.5
-0.3
-0.5
N.D.
auxotrophy
Dropout Complete
+0.6
+0.3
+0.2
+0.4
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+1.4
+0.8
+0.5
-0.1
N.D.
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