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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9764 and 9765 are separated by 278 nucleotides
9765 and 9766 are separated by 909 nucleotides
9766 and 9767 are separated by 1721 nucleotides
9767 and 9768 are separated by 586 nucleotides
mRNA_1396: 9764 - Hypothetical Protein, at 172,419 to 173,406
9764
mRNA_1397: 9765 - K03242 EIF2S3 translation initiation factor 2 subunit 3, at 173,685 to 176,206
9765
mRNA_1398: 9766 - Hypothetical Protein, at 177,116 to 177,574
9766
mRNA_1399: 9767 - Hypothetical Protein, at 179,296 to 180,900
9767
mRNA_1400: 9768 - K20360 TBC1D22, GYP1 TBC1 domain family member 2, at 181,487 to 184,184
9768
Group
Condition
mRNA
_1396
mRNA
_1397
mRNA
_1398
mRNA
_1399
mRNA
_1400
9764
9765
9766
9767
9768
buoyancy on lipid accumulation
40 hrs High Buoyancy
-1.6
N.D.
N.D.
-0.3
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.9
N.D.
N.D.
+0.0
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.9
N.D.
N.D.
+0.0
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.8
N.D.
N.D.
+0.1
+0.1
growth on ricinoleic acid
YNB Glucose
-0.2
N.D.
N.D.
-0.1
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.0
N.D.
N.D.
-0.3
-0.1
growth on oleic acid
YNB Oleic Acid
-0.3
N.D.
N.D.
+0.0
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
N.D.
N.D.
+0.0
-0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.1
N.D.
N.D.
-0.1
-0.1
growth on oleic acid
YNB Glucose
-0.2
N.D.
N.D.
+0.1
+0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.0
N.D.
N.D.
-0.0
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.5
N.D.
N.D.
+0.2
+0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.0
N.D.
N.D.
+0.2
-0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.0
N.D.
N.D.
-0.2
+0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
N.D.
N.D.
-0.1
+0.4
growth on ypd
YPD
-0.2
N.D.
N.D.
+0.1
+0.4
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
N.D.
N.D.
-0.0
+0.2
ypd buoyancy
40 hrs High Buoyancy
+0.3
N.D.
N.D.
-0.3
+0.3
ypd buoyancy
40 hrs Low Buoyancy
+0.4
N.D.
N.D.
-0.2
+0.1
auxotrophy
YNB Glucose
+0.6
N.D.
N.D.
-0.2
+0.3
auxotrophy
Dropout Complete
+0.4
N.D.
N.D.
+0.0
+0.3
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