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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9767 and 9768 are separated by 586 nucleotides
9768 and 9769 are separated by 121 nucleotides
9769 and 9770 are separated by 463 nucleotides
9770 and 9771 are separated by 387 nucleotides
mRNA_1399: 9767 - Hypothetical Protein, at 179,296 to 180,900
9767
mRNA_1400: 9768 - K20360 TBC1D22, GYP1 TBC1 domain family member 2, at 181,487 to 184,184
9768
mRNA_1401: 9769 - Hypothetical Protein, at 184,306 to 185,166
9769
mRNA_1402: 9770 - K06654 PHO80 phosphate system cyclin PHO80, at 185,630 to 187,322
9770
mRNA_1403: 9771 - K08190 SLC16A14 MFS transporter, MCP family, solute carrier family 16 (monocarboxylic acid transporters), member 14, at 187,710 to 190,029
9771
Group
Condition
mRNA
_1399
mRNA
_1400
mRNA
_1401
mRNA
_1402
mRNA
_1403
9767
9768
9769
9770
9771
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-0.1
-0.7
-0.9
+0.4
ypd buoyancy
40 hrs High Buoyancy
-0.3
+0.3
-0.5
-0.7
-0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.0
+0.0
-0.3
-0.9
+0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
+0.2
-0.6
-0.5
+0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.1
-0.0
-0.7
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
+0.1
-0.4
-0.4
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.2
+0.4
-0.1
-0.2
-0.3
auxotrophy
YNB Glucose
-0.2
+0.3
+0.1
-0.5
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.1
+0.3
-0.4
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.0
-0.1
-0.0
+0.4
-0.6
growth on ypd
YPD
+0.1
+0.4
-0.8
+0.1
+0.4
auxotrophy
Dropout Complete
+0.0
+0.3
+0.1
-0.2
+0.0
growth on oleic acid
YNB Oleic Acid
+0.0
+0.0
+0.0
+0.4
-0.2
growth on oleic acid
YNB Glucose
+0.1
+0.1
+0.4
+0.1
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.0
-0.2
+0.5
+0.7
-0.5
growth on ricinoleic acid
YNB Glucose
-0.1
-0.1
+1.3
+0.2
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
+0.1
+0.3
+0.6
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
+0.2
+0.4
+0.5
+0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
-0.0
+1.2
+0.4
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
+0.4
+0.4
+0.7
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
+0.4
+0.4
+0.7
+0.5
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