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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9768 and 9769 are separated by 121 nucleotides
9769 and 9770 are separated by 463 nucleotides
9770 and 9771 are separated by 387 nucleotides
9771 and 9772 are separated by 770 nucleotides
mRNA_1400: 9768 - K20360 TBC1D22, GYP1 TBC1 domain family member 2, at 181,487 to 184,184
9768
mRNA_1401: 9769 - Hypothetical Protein, at 184,306 to 185,166
9769
mRNA_1402: 9770 - K06654 PHO80 phosphate system cyclin PHO80, at 185,630 to 187,322
9770
mRNA_1403: 9771 - K08190 SLC16A14 MFS transporter, MCP family, solute carrier family 16 (monocarboxylic acid transporters), member 14, at 187,710 to 190,029
9771
mRNA_1404: 9772 - KOG2504 Monocarboxylate transporter, at 190,800 to 192,983
9772
Group
Condition
mRNA
_1400
mRNA
_1401
mRNA
_1402
mRNA
_1403
mRNA
_1404
9768
9769
9770
9771
9772
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
-0.4
-0.4
-0.1
-0.5
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
-0.6
-0.5
+0.0
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.7
-0.9
+0.4
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.0
-0.3
-0.9
+0.0
+0.1
ypd buoyancy
40 hrs High Buoyancy
+0.3
-0.5
-0.7
-0.3
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.0
+0.4
-0.6
-0.4
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.0
-0.7
+0.0
+0.3
ypd buoyancy
40 hrs Low Buoyancy
+0.1
+0.3
-0.4
-0.2
+0.1
growth on oleic acid
YNB Oleic Acid
+0.0
+0.0
+0.4
-0.2
-0.3
growth on oleic acid
YNB Glucose
+0.1
+0.4
+0.1
-0.4
-0.2
auxotrophy
YNB Glucose
+0.3
+0.1
-0.5
-0.1
+0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.4
-0.1
-0.2
-0.3
+0.3
auxotrophy
Dropout Complete
+0.3
+0.1
-0.2
+0.0
+0.2
growth on ypd
YPD
+0.4
-0.8
+0.1
+0.4
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
+0.5
+0.7
-0.5
-0.1
growth on ricinoleic acid
YNB Glucose
-0.1
+1.3
+0.2
-0.4
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
+1.2
+0.4
-0.3
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
+0.3
+0.6
-0.0
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
+0.4
+0.5
+0.5
-0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.4
+0.4
+0.7
+0.2
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.4
+0.4
+0.7
+0.5
+0.0
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