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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9773 and 9774 are separated by 1348 nucleotides
9774 and 9775 are separated by 1112 nucleotides
9775 and 9776 are separated by 693 nucleotides
9776 and 9777 are separated by 555 nucleotides
mRNA_1405: 9773 - Hypothetical Protein, at 193,518 to 194,541
9773
mRNA_1406: 9774 - K00002 AKR1A1, adh alcohol dehydrogenase (NADP+), at 195,890 to 197,396
9774
mRNA_1407: 9775 - K02937 RP-L7e, RPL7 large subunit ribosomal protein L7e, at 198,509 to 200,718
9775
mRNA_1408: 9776 - K02936 RP-L7Ae, RPL7A large subunit ribosomal protein L7Ae, at 201,412 to 202,510
9776
mRNA_1409: 9777 - ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257, at 203,066 to 203,566
9777
Group
Condition
mRNA
_1405
mRNA
_1406
mRNA
_1407
mRNA
_1408
mRNA
_1409
9773
9774
9775
9776
9777
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.8
N.D.
N.D.
-0.4
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.2
N.D.
N.D.
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.0
N.D.
N.D.
-0.3
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.1
N.D.
N.D.
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.0
N.D.
N.D.
-0.3
auxotrophy
Dropout Complete
N.D.
-0.1
N.D.
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.3
N.D.
N.D.
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.1
N.D.
N.D.
-0.2
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.1
N.D.
N.D.
+0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.1
N.D.
N.D.
-0.1
growth on oleic acid
YNB Glucose
N.D.
+0.0
N.D.
N.D.
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.1
N.D.
N.D.
-0.1
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.2
N.D.
N.D.
+0.3
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.2
N.D.
N.D.
-0.1
auxotrophy
YNB Glucose
N.D.
+0.1
N.D.
N.D.
+0.1
growth on oleic acid
YNB Oleic Acid
N.D.
-0.0
N.D.
N.D.
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.3
N.D.
N.D.
+0.5
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.1
N.D.
N.D.
+0.1
growth on ypd
YPD
N.D.
-0.0
N.D.
N.D.
+0.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.2
N.D.
N.D.
+0.9
growth on ricinoleic acid
YNB Glucose
N.D.
-0.0
N.D.
N.D.
+0.6
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