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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9776 and 9777 are separated by 555 nucleotides
9777 and 9778 are separated by 133 nucleotides
9778 and 9779 are separated by 992 nucleotides
9779 and 9780 are separated by 506 nucleotides
mRNA_1408: 9776 - K02936 RP-L7Ae, RPL7A large subunit ribosomal protein L7Ae, at 201,412 to 202,510
9776
mRNA_1409: 9777 - ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257, at 203,066 to 203,566
9777
mRNA_1410: 9778 - K02920 RP-L36e, RPL36 large subunit ribosomal protein L36e, at 203,700 to 204,648
9778
mRNA_1411: 9779 - Hypothetical Protein, at 205,641 to 206,403
9779
mRNA_1412: 9780 - K11699 RDR, RDRP RNA-dependent RNA polymerase, at 206,910 to 211,871
9780
Group
Condition
mRNA
_1408
mRNA
_1409
mRNA
_1410
mRNA
_1411
mRNA
_1412
9776
9777
9778
9779
9780
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.3
N.D.
-0.3
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.1
N.D.
-0.2
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.3
N.D.
-0.0
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.1
N.D.
-0.1
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.1
N.D.
+0.1
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.1
N.D.
-0.1
+0.1
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.2
N.D.
+0.1
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.4
N.D.
+0.5
-0.1
growth on oleic acid
YNB Glucose
N.D.
-0.0
N.D.
+0.2
-0.1
auxotrophy
Dropout Complete
N.D.
-0.1
N.D.
+0.0
+0.1
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.1
N.D.
+0.4
-0.2
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.2
N.D.
+0.2
+0.0
growth on oleic acid
YNB Oleic Acid
N.D.
+0.2
N.D.
-0.0
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.2
N.D.
+0.1
+0.3
auxotrophy
YNB Glucose
N.D.
+0.1
N.D.
+0.2
-0.1
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.0
N.D.
+0.4
-0.1
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.3
N.D.
+0.4
-0.2
growth on ypd
YPD
N.D.
+0.6
N.D.
-0.0
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.5
N.D.
+0.1
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.9
N.D.
+0.2
-0.1
growth on ricinoleic acid
YNB Glucose
N.D.
+0.6
N.D.
+0.3
+0.2
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