Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9781 and 9782 are separated by 270 nucleotides9782 and 9783 are separated by 851 nucleotides9783 and 9784 are separated by 3116 nucleotides9784 and 9785 are separated by 1571 nucleotides mRNA_1413: 9781 - KOG1711 Mitochondrial/chloroplast ribosomal protein L22, at 213,856 to 214,954 9781 mRNA_1414: 9782 - K19801 PI4KB phosphatidylinositol 4-kinase B, at 215,225 to 219,858 9782 mRNA_1415: 9783 - Hypothetical Protein, at 220,710 to 221,651 9783 mRNA_1416: 9784 - BLAST amino-acid permease [Pseudozyma hubeiensis SY62], at 224,768 to 225,675 9784 mRNA_1417: 9785 - K01567 pdaA peptidoglycan-N-acetylmuramic acid deacetylase, at 227,247 to 228,373 9785
Group Condition mRNA_1413 mRNA_1414 mRNA_1415 mRNA_1416 mRNA_1417
9781 9782 9783 9784 9785
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. -0.0 -0.6 -0.4
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. -0.4 -0.6 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. -0.7 -0.4 +0.3
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. -0.5 -0.3 +0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. -0.4 +0.2 -0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. +0.6 -0.6 -0.5
growth on ypd YPD N.D. N.D. -0.1 -0.7 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. -0.8 +0.1 +0.5
auxotrophy YNB Glucose N.D. N.D. +0.7 -0.2 -0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. +0.6 -0.6 +0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. -0.0 -0.4 +0.5
growth on oleic acid YNB Glucose N.D. N.D. +0.7 -0.2 -0.3
auxotrophy Dropout Complete N.D. N.D. +0.7 +0.0 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. +0.4 -0.2 +0.3
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. -0.3 +0.6 +0.2
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. +0.7 -0.1 -0.1
growth on oleic acid YNB Oleic Acid N.D. N.D. +1.1 -0.3 +0.2
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. +0.6 +0.3 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. +1.0 +0.6 -0.3
growth on ricinoleic acid YNB Glucose N.D. N.D. +0.7 +0.5 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. +1.2 +0.6 +0.8
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