Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9782 and 9783 are separated by 851 nucleotides9783 and 9784 are separated by 3116 nucleotides9784 and 9785 are separated by 1571 nucleotides9785 and 9786 are separated by 633 nucleotides mRNA_1414: 9782 - K19801 PI4KB phosphatidylinositol 4-kinase B, at 215,225 to 219,858 9782 mRNA_1415: 9783 - Hypothetical Protein, at 220,710 to 221,651 9783 mRNA_1416: 9784 - BLAST amino-acid permease [Pseudozyma hubeiensis SY62], at 224,768 to 225,675 9784 mRNA_1417: 9785 - K01567 pdaA peptidoglycan-N-acetylmuramic acid deacetylase, at 227,247 to 228,373 9785 mRNA_1418: 9786 - HMMPfam-Fungal protein of unknown function (DUF1748)-PF08520, at 229,007 to 229,464 9786
Group Condition mRNA_1414 mRNA_1415 mRNA_1416 mRNA_1417 mRNA_1418
9782 9783 9784 9785 9786
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.0 -0.6 -0.4 -1.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.4 +0.2 -0.6 -1.2
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.3 +0.6 +0.2 -1.7
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.4 -0.6 +0.1 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.8 +0.1 +0.5 -0.6
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.7 -0.4 +0.3 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.6 -0.6 +0.1 -0.7
ypd buoyancy 40 hrs High Buoyancy N.D. -0.5 -0.3 +0.1 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.6 -0.6 -0.5 +0.0
growth on ypd YPD N.D. -0.1 -0.7 +0.3 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.4 -0.2 +0.3 -0.8
auxotrophy YNB Glucose N.D. +0.7 -0.2 -0.6 +0.2
growth on oleic acid YNB Glucose N.D. +0.7 -0.2 -0.3 +0.2
auxotrophy YNB Glucose 75mM Arginine N.D. +0.7 -0.1 -0.1 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +1.0 +0.6 -0.3 -0.7
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.0 -0.4 +0.5 +0.6
auxotrophy YNB Glucose 75mM Methionine N.D. +0.6 +0.3 +0.1 +0.1
auxotrophy Dropout Complete N.D. +0.7 +0.0 -0.3 +0.7
growth on oleic acid YNB Oleic Acid N.D. +1.1 -0.3 +0.2 +0.3
growth on ricinoleic acid YNB Glucose N.D. +0.7 +0.5 +0.2 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +1.2 +0.6 +0.8 -0.3
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