Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9785 and 9786 are separated by 633 nucleotides9786 and 9787 are separated by 453 nucleotides9787 and 9788 are separated by 593 nucleotides9788 and 9789 are separated by 868 nucleotides mRNA_1417: 9785 - K01567 pdaA peptidoglycan-N-acetylmuramic acid deacetylase, at 227,247 to 228,373 9785 mRNA_1418: 9786 - HMMPfam-Fungal protein of unknown function (DUF1748)-PF08520, at 229,007 to 229,464 9786 mRNA_1419: 9787 - HMMPfam-PH domain-PF00169,ProSiteProfiles-PH domain profile.-PS50003,SMART-Pleckstrin homology domain.-SM00233,SUPERFAMILY--SSF50729, at 229,918 to 235,537 9787 mRNA_1420: 9788 - KOG4269 Rac GTPase-activating protein BCR/ABR, at 236,131 to 238,616 9788 mRNA_1421: 9789 - K06950 K06950 uncharacterized protein, at 239,485 to 240,342 9789
Group Condition mRNA_1417 mRNA_1418 mRNA_1419 mRNA_1420 mRNA_1421
9785 9786 9787 9788 9789
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.7 -0.3 -0.5 -1.6
facs on lipid accumulation Sorted No BODIPY Gate -0.6 -1.2 -0.1 +0.4 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 -1.1 +0.1 +0.0 -0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -1.7 +0.1 +0.5 -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 +0.0 +0.0 -0.4 -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.7 +0.1 -0.1 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 -0.8 +0.0 -0.2 -0.3
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.1 +0.2 +0.1 -1.3
auxotrophy Dropout Complete -0.3 +0.7 -0.0 -0.0 -1.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.5 -0.6 +0.0 +0.4 -0.9
auxotrophy YNB Glucose -0.6 +0.2 +0.1 +0.2 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid +0.8 -0.3 -0.0 -0.1 -0.7
growth on oleic acid YNB Glucose -0.3 +0.2 -0.1 -0.0 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.0 +0.0 -0.0 -0.3
growth on ricinoleic acid YNB Glucose +0.2 +0.1 -0.0 +0.2 -0.5
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 +0.2 -0.0 -0.4 -0.2
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.3 +0.2 -0.1 +0.3
growth on oleic acid YNB Oleic Acid +0.2 +0.3 -0.0 -0.2 -0.1
growth on ypd YPD +0.3 +0.1 -0.1 +0.2 -0.2
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.2 +0.3 +0.1 +1.0
ypd buoyancy 40 hrs Median Buoyancy +0.5 +0.6 +0.3 +0.3 +0.7
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